Gene detail

Detailed information of FUN_000303-T1 in Colpophyllia natans

Genomic Location: contig_1:3980779...4002374
NR annotation: XP_020611938.1, uncharacterized protein LOC110050360 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_000303-T1

ATGGAGGATTTCAAATTGTTATATCGGCTCGGTGACACCGGTTTTGTTAATTTAAAGCAGATGATACATGAACCCACGGGCCACATTATGACAGTCCAGATTCTGCATGTTTCCTCCACAAATGAGAGGAAGATGCTTTTAAACACTGGGAATGGCTTTGTGGTGCGCCTAGCGGACTGGTCACACATCATAACCATTTATGGTGTCATGGCTGAAAAGGAAAACGTTTGGATCTGTATGGAGCCCATGAGAGCAACAATATCGGATTTGCATTACAATATGGGCGGCAGAAGGATACCTGAGGAGGTCCTTCGAGAAATGGCCATTGCCGTACTTCGTGCGTTAAACGATCTACAAAATTTGAGCATCCGACACGAAGGTTCGTTCTGGGACAATATTTTAGTGGATGACAAAGCAAATTTCAAGTACTGTTTTGTACCTGATACACGAGACCATgGGTTTATTGATGATTACATACGGATAGAGAGCCTAGGAAGGTTCCTGACATGGCTTTTAACAGGCACATTACAAAGCATTCTCCCTGCTGATGATCCATGCTCAGATGAGTTTAGAGATTTTGTTGCTCAGTGCGGCAGTCCAGGAGACTATTATGAAAGACCGAGCTATGCCTTGTTGTTGGAACATGCGTTCATAAAACAAGGCAACGAACAGAGCCGTTTTGACAGCAAACGTTGGGTAACAACTATTCTTCAAAAACTGGAGCTGCACGGGGAAATTCCTCCAGAGATTACGGTACGAGGACGTTTGGCTTTGGAAGCCTACAAAAAGGCCCTTGCCGAAGGAAAGACTTGTGACAAAAGGGTACCAGTCATGTTGATTGGACAGGACAGGTCAGGAAagaccagcttaaagaagtcactcaGGGGAGAGCCTTTCAACTCAAATGAAGAGAGCACTGTAGGGATAGATGTTGATCCttctcatttcaaattatcaactgagGTTTGGAAGATAGGGGAGaaggaacaagaaagaaaatcgGAGACGTCTATTTCCTATGTGTACCATGCGGCGCgagcaactgttgaaaatttgaaggaGGAAAAAAAGGTTCCCAGTCCCGAGGAAGGAGTTCCAGAGACCAAACAGTCTGGAAACATTCCTGTGGTTGACCGAGTCGCCACTCTAGTATCTTTACCAAACACAGGAAGACAAGACGCCAGGTCTGATGAAATGTCAAACGATCCAGAATCTGTTCTGGACTTCCGATATCCTGAACAAGATGACAGCATACCAAAAGATGTAGAAACCGAGATTGTacagcgactgaaaaacgagggtaaagtggaagacgaagatgtacattccgttttgtgggattttgctggacaatcagtttactatacaacacacccactttttctcACTTCAAGAGGAATCTATCTTCTTGTTAATGACCTCAGCCAAAATCCCCATGAAAAAGCGAAACCTGTTGTGAAGCAAGGAATGTACAGGAAACTACAAGACAGCTTTAGTTTGAAaactaactttgattatttAGATTTTTGGATGTCTTCGATTGCTTCTCTGGCGAGCCAAGAAGAAAGTGATCAGGAAAGTGCCGAGTCTAAGGTGTTACCAGAGAAACTTCCCGCAGTTTTCTTAGTGTGTACGCATGCTGATACACTGCGCGAACGCAAGTCTGATCCAAGTACAATAGCCAGGGAGTTATTTGGGTCTCTGCAGACCAAACCATACAAAATCCACCTGTGTGATGTCTTcgttgtggataacactatgTCGGGTCATGGTTCTGAGTGTCCAGAAGTCGTTCGACTGCGTCAAAGAGTACTTGCCGTCTCTAAAGCGCTGCCTCAGATGAAGGAAGCCATTCCGatcaaatggctaaaatatgaGAAGGACCTCCAGGCCATGAAGGAAGATGGTACGAAATGGATAGGCCTTGACGCAGCAAAAACAATCGCATCTGAAGCATGTGATATCATTGATGATCAAGAATTCCAGACGTTACTAAACTTCCTGCATGACAGGAGAATTTTGATTCACTTCAGTGACACTGCAGAACTGGATAAATTGGTGGTCTTGGACCCGCAGTGGTTGATTGACGTGTTTAAAGAGGTGATAACCGTCAGGCCCTATAACATTGAGGAGATGAAATTTAAAGCACTTTGGGATAAGCTTGAGAAAAATGGGATCCTGGACGAAAaacttttagaacgtgtttgGGCTCCTTTATTGGACCACAAAGAAACCTTTGAGAGTCTTATCGCGATGATGGAGAAATTTAGCTTGGTTTGTTCTTTGCCTTCATCTGATGCCTCTTGTAGTAAGCAGTACCTGGTACCGTCCATGTTGATGTCACATCCACCCGAGGACATAATGAGCTTGGTTGAATCAGCGCGTATTCCCCCgcttttccttaaatttgaatctGGTCAAGTTCCGCCTGGTTTGTTTCCCCGACTTGTGCTGCAGTTCTTTCAGTGGGATCAAGAAGGACAAGGGAAGCCGCAACTGTACCACAATTTCGCCAGATTTTACACCTCTCAAAATGAAGACTGCTCCGTAATCCTTCTGTGCCATTCATCTTCCATTGAAGTTGTTATTCACCAAGAGACGAGTCAAGAGTTGGCAGACAGTCTACAATCAAAGCTCTCTTGTTCTGCAGATGCCAGCTACGACACGTGTGAGGTGGCCTGTGCTCGTGCAGTTCGTAGGCAGCTGGGATTGATACTTGAGTCCATTCGAAATGAGTTCTGTTGGctgaagaatatgaaatatgaagtCAGCTTCATCTGCCGAGTCTGTTGTCAAGAAGGCGCGCTTAAATTCTGTCGCATACATGCTACACAAGGTTGCAAGCTTGAGGAATGCCTGCACTTCTGGTCTGAGTCTCAGTTGTGTAATGTCAAGGTCAACCGTTGCGACAAATTAGCAGCTGCACGGAGCAACAGAGTTGCCGTCAAGCAGTTCGAACCATGGTTTGCCCCTCAAAAAAATCAGATGGCAATTGATAAGTATAATGGGGGAACTTTGGCGAATATGCAAGAAAGCAAAGCAATTACCCTTTCTTGTGAGGTTCAAGAATCCCTTTTCTGCAAGTCGTCTGATGCCAGAGAAGTTGTTCGTCAACTACAAGAGACTCTGCAGCCGGATCAAGCTTCTCTGCAAGAGCCAGGACTTGAAACCAGGCAAATGATCCGTTGTCTAGCAAGGACAGCTAAAGATTCAAACAGGCTTGATGTGTTTGACCATTTGAGAGAGATTACACCAGCTGGAACGTGTGGTCCTCGGTTGTCTGAACACCTTGATGTCGGAAAGATCCCATTTTCCAAGAAAAGAGACCTCACAGTTGATTTATGTGGTGGAGAAGAGTGGAAATTGGTTGCTGAGGTGCTGGGCCTCACCGAAAAAGAGATTCGTTTCCTTGACCACCGTACTTTGAACCCACTTGACTCAGCCCTGGCTTTCATTGCTAAGCAGCGCCACATTACTGTGGGAGAATTGTACGACATGATAAGTGAATGTGGCTTTCCAGCGATAGCTGACCTATGGTTATAA

Transcript

FUN_000303-T1

Protein

Uniprot

Uniprot term	Description
Q90891	Dual specificity mitogen-activated protein kinase kinase 2 OS=Gallus gallus OX=9031 GN=MAP2K2 PE=2 SV=1
Q1HG70	Dual specificity mitogen-activated protein kinase kinase 2 OS=Canis lupus familiaris OX=9615 GN=MAP2K2 PE=2 SV=1
P36507	Dual specificity mitogen-activated protein kinase kinase 2 OS=Homo sapiens OX=9606 GN=MAP2K2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052468	Family	Dual specificity MAP kinase kinase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47238	MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan