Gene detail

Detailed information of FUN_000400-T1 in Siderastrea siderea

Genomic Location: contig_1:5896284...5934011
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_000400-T1

ATGATGTGCGATATAATGCCTACGATCTCTGAGGACCCACCAGAGATCAATTATGGGCAAAATGAGGAGACGAACTTCGAACAACTTATGGTTAACATGCTCGACGAACGGGACAAGCTGATGGAAACTCTTCGCGAAACTCAAGACTCGCTTGCGCTCACGAGAGCGAAACTATCAGAAtgccaaaaggaaaaggatgGCCTTATGAATCATTTGGAGTCTGTGCTTAGTAATggCGACGACCAACTAATTGAAAGGCTGGCTGGGTTAGATGGAATTATCACCGATTCGGGGAATAATTTGAAAGAAGACTCCGGCAAAAACAGAGTTCGTGTATTAGCCGAGGATTTTGCAACAATGCTCAAAGAGTTAAATCAAGCAAGGGAACAGCTATTAGAAAAAGACGAAGAAATTAGTGAATTGAAGTCAGAGAGGTGTAATACAAGGCTTCTTCTAGAACATTTAGAATGTTTAGTAGCACGGCATGAAAGATCATTAAGAATGACAGTTGTCAAACGACAAGCGGCAACAACAGGTGGTGTATCATCGGAAGTGGAAGTTCTCAAGGCTCTGAAATCACTGTTTGAACATCACAAGGCTCTTGACGAAAAGGTGCGTGAAAGACTACGGCAGGCTGTAGACAAGAACAACGCACTTGAAGGAGAGCTCGAAGAAACACGAGAAAAGCTCAGAGAGCTTGAACAAGAGAATGAAGAAATCAGACTTCGGAATCTCAGAAGAGTGAGAACCGAAGAAAGACTTCACTCATCGAGTGAAAACTGTTTAGAAAATGGTGATGGAGATTCTGCAGGAAAGCATCTCTCTAATGGACCCATTAATATTGATGTGAGTGCACATGAAGAGCAAATGGAAGAGATGCAGTTTCTCCTTGACAAACGAACCAAGGAGGTTGAACGGCTCACAAGGGAAAATAAAGACTTGAAAGAGAGATGTACAACTCTTGAAGAAGAACTGAGAATATGTAATAAGCAGCTAGATAGAGGAAATACTTCCATTCAGAGACTGGAAAGAGATTTAGATGAGGCAGCCGCACAGAAATCTGACATGGAGGATAGAATAACGACTCTTGAGAAACGTTATGTGCGACTTCAGCATGAAGTCACCGCGCTGAATGATGACAATGAGAGACTGGAAACAGAACTCGCTAGTAAAGAAAGTGAACTTATCCAGACGGAAGAAAAACTCCGGCTACAGCAAGAAAAACTGGAACTTGCTGAGCAGAATCTTAATCAGTCATTAAGGAAAGCTGAAGCATTACCCAAAATAGAGGAAGAACTAGCAGTGCGACTGGCTGCATTAAATGAGGCTGCTGAGAAACAAGGCACAGCTGAAGAAACCGTTCAGCAGCTACAAATTCAGGTTCAAGACCTTCAAGCAGAGCTTAATAGGGCACGTGAAAGAGAAAAGATGAATGAAGACCATAATTCTAGGTTATCAAACACTATTGACAAACTTCTTGGCGAGTCAAATGAAAGACTGCAAGTTCACCTCAAGGAGCGTATGGCTGCTCTAGAAGAGAAGACTGCTTTGACTCAAGAACTTAATGCTGTGAAGACACAAGTAGAAGATCTTCAAAGAGAAAAGGAAATATTAGCTCTAGAACTTGGAAGGCTTAAtgaagattttgaaaaacaaaaaacccagGGTGCTCCGGAGGCCTCTGCTGCTGCCAATGGTCCTGTAAAGGATTTCAGTGAACCTGTAAAACGAGAGACAAAGGGTCGCTCTGGAATAGAGGATACACCTAGCAGAGTGTTCACACTCAATGAACAGGAATGGCAGAAGCTTGAGCAGGAGAGCGTACTTAAGAATGTTGCCATGGCATTTGACAACAAGCAACTCTCTGACATTGAAAGTGATGCTGGCAGTGAGACTTCAGAAGACAGGGGAGTGGGTGGGGACGCTCAGACACTTGCCTCGCTGTTACAGCAGCAGATAGACATAATTAACAAGGAACTCAACCAACTACAAGAAGAACATAAATCAACAGAGAAAAGAGCCATTGATCTGGAGAAGTCTGTAACACGAAACCCAAGGCATCAAGACTTTTATACAGATTCTCAACAGGAGCTGGTTGCATCTTCCACTTCATTTCCATTTCCTCCCCTTGACCCAATGGACACCACACCAATCTGGGTGAGGTCCAGCAAGGAAGGGTCACTGAATGCCCTTGGTGACGCTCATACACCTCCCACACCCAGCTCAAGTGCTTCAGATTCAACAGAAAGCTCTAAACCCAGTCAGTCAGGTGCTAATTCCATTACATCACCTGATGATACTTTAAGTTCAGTAACTGTTCCTTCCACTAATGGCATGATCACAACAAGGGATAATTCAGTGGACTCTTTACCAAGTATTACGAGCACAACCAGTAGCGCAGAATCTTTGTCCAAGAACAAGTCTCATAGGAAAGGAATCAAAGGATCTATTGGACGCATTTttggaaataaaacaaagacTAAACAAAAGGACTCTGCGGGGGTTCATACAGACTCTTACTCAATGTCCAGTGAACCAGTTCCAGGGTCTACAGGGCAGAGAGAATTAGATAGGAGAATAAAAAATAAGTCGCATCTGTTAGCAGAAGCATTAGAAGCTGGGACACCTTTCGCTTTGTGGAATGCACCTACAGTTGTGGCTTGGTTAGAGTTGTGGGTGGGTATGCCTGCCTGGTATGTTGCAGCTTGTAAAGCAAATGTCAAGAGTGGAGCAATCATGTCGGCTTTGTCAGATACTGAGATTCAGCATGAGATTGGGATATCCAACCCTCTTCATCGTCTTAAGTTACGACTTGCCATTCAAGAGATTGTCACCCTTACAAGTACATCTTCACCTACAACCAACAGGAATTCTTTAGTCTATGGTGAAATGAACCATGACTGGATTGCCAATGAATGGCTACCAAGTCTGGGACTTGCTCAGTACAAGAGTACTTTCCAAGAATGTTTAGTAGATGCAAGAATGCTGGAGCACATCAGCAAGAAGGAATGTCAAAAGTATTTGAAAGTAGTTGATGGTTTTCACAGGCACAGTTTACAATGTGGTGTCAAATGTTTAGGATTTATGAATTATGATAGACGGTTGCTagaaaaaagaaggcaaatgtgTGAAGATGAAGCTAAAGATGTGCTTGTCTGGAGTAATGAACGTGTAATTAAGTGGCTAAGAAAGATTGGACTATCAGAGTATGCTGATAATTTGCATGGCACAGGAGTTCACGGTGCTGTGATCGCATTGGATGAGACTTTTGACTTCAGTACTTTAGCGTATGCTCTACAGATACCCAGTCAGAACACACAAATACGTCAAATTCTTGAACGGGACTTCAACTGGCTCCTGGCAAATGCTAGTGACAGAGAAATTGTAGATGAACTGGGCAATGGGGGCGACTTCAAACGCTCCAAATCCTGGCGGAAGATGTTTAAGCAGCGAGATAAAGGAAAAGACAAGGCCAGAGACAAAGAGCCTGCACGAAAGAACTCTTCAGGATCTGAGTCATCTCTCAGCCAATCGAGTGTGAGCTCATCTCCAAAGCCATCATCTAAAAATGCCAAACATAACAGCCACAGTGACAATAAAGATGCTGTGATCACAAGTGGCAATCTTGCGTAG

Transcript

FUN_000400-T1

CTGTGTTGTGTATCTTGTTCTTTTGCGATTGTCGAGCGAATTACGTGTAGGATCGTGTTTATTTGTCTTCGCATCTACTGCAGAGTTATACACTGAGCTAAGGATAAGCGAGGAATATTCCGTGTTTTGTAAGATGGTGGAAGAATGCGCGTTAGACAAATTCCATCGACCGTTTTCGCGCTAGAGGAAGTGTGACCGGTCAACCCCGTGCGGACATGTAATCGGACGTTAAATCGCTCACTTCTCGTCATCTGCTTTTGTCTGGGCTTCGGCGTTTCGTTCCATCGCCAAAATGATGTGCGATATAATGCCTACGATCTCTGAGGACCCACCAGAGATCAATTATGGGCAAAATGAGGAGACGAACTTCGAACAACTTATGGTTAACATGCTCGACGAACGGGACAAGCTGATGGAAACTCTTCGCGAAACTCAAGACTCGCTTGCGCTCACGAGAGCGAAACTATCAGAAtgccaaaaggaaaaggatgGCCTTATGAATCATTTGGAGTCTGTGCTTAGTAATggCGACGACCAACTAATTGAAAGGCTGGCTGGGTTAGATGGAATTATCACCGATTCGGGGAATAATTTGAAAGAAGACTCCGGCAAAAACAGAGTTCGTGTATTAGCCGAGGATTTTGCAACAATGCTCAAAGAGTTAAATCAAGCAAGGGAACAGCTATTAGAAAAAGACGAAGAAATTAGTGAATTGAAGTCAGAGAGGTGTAATACAAGGCTTCTTCTAGAACATTTAGAATGTTTAGTAGCACGGCATGAAAGATCATTAAGAATGACAGTTGTCAAACGACAAGCGGCAACAACAGGTGGTGTATCATCGGAAGTGGAAGTTCTCAAGGCTCTGAAATCACTGTTTGAACATCACAAGGCTCTTGACGAAAAGGTGCGTGAAAGACTACGGCAGGCTGTAGACAAGAACAACGCACTTGAAGGAGAGCTCGAAGAAACACGAGAAAAGCTCAGAGAGCTTGAACAAGAGAATGAAGAAATCAGACTTCGGAATCTCAGAAGAGTGAGAACCGAAGAAAGACTTCACTCATCGAGTGAAAACTGTTTAGAAAATGGTGATGGAGATTCTGCAGGAAAGCATCTCTCTAATGGACCCATTAATATTGATGTGAGTGCACATGAAGAGCAAATGGAAGAGATGCAGTTTCTCCTTGACAAACGAACCAAGGAGGTTGAACGGCTCACAAGGGAAAATAAAGACTTGAAAGAGAGATGTACAACTCTTGAAGAAGAACTGAGAATATGTAATAAGCAGCTAGATAGAGGAAATACTTCCATTCAGAGACTGGAAAGAGATTTAGATGAGGCAGCCGCACAGAAATCTGACATGGAGGATAGAATAACGACTCTTGAGAAACGTTATGTGCGACTTCAGCATGAAGTCACCGCGCTGAATGATGACAATGAGAGACTGGAAACAGAACTCGCTAGTAAAGAAAGTGAACTTATCCAGACGGAAGAAAAACTCCGGCTACAGCAAGAAAAACTGGAACTTGCTGAGCAGAATCTTAATCAGTCATTAAGGAAAGCTGAAGCATTACCCAAAATAGAGGAAGAACTAGCAGTGCGACTGGCTGCATTAAATGAGGCTGCTGAGAAACAAGGCACAGCTGAAGAAACCGTTCAGCAGCTACAAATTCAGGTTCAAGACCTTCAAGCAGAGCTTAATAGGGCACGTGAAAGAGAAAAGATGAATGAAGACCATAATTCTAGGTTATCAAACACTATTGACAAACTTCTTGGCGAGTCAAATGAAAGACTGCAAGTTCACCTCAAGGAGCGTATGGCTGCTCTAGAAGAGAAGACTGCTTTGACTCAAGAACTTAATGCTGTGAAGACACAAGTAGAAGATCTTCAAAGAGAAAAGGAAATATTAGCTCTAGAACTTGGAAGGCTTAAtgaagattttgaaaaacaaaaaacccagGGTGCTCCGGAGGCCTCTGCTGCTGCCAATGGTCCTGTAAAGGATTTCAGTGAACCTGTAAAACGAGAGACAAAGGGTCGCTCTGGAATAGAGGATACACCTAGCAGAGTGTTCACACTCAATGAACAGGAATGGCAGAAGCTTGAGCAGGAGAGCGTACTTAAGAATGTTGCCATGGCATTTGACAACAAGCAACTCTCTGACATTGAAAGTGATGCTGGCAGTGAGACTTCAGAAGACAGGGGAGTGGGTGGGGACGCTCAGACACTTGCCTCGCTGTTACAGCAGCAGATAGACATAATTAACAAGGAACTCAACCAACTACAAGAAGAACATAAATCAACAGAGAAAAGAGCCATTGATCTGGAGAAGTCTGTAACACGAAACCCAAGGCATCAAGACTTTTATACAGATTCTCAACAGGAGCTGGTTGCATCTTCCACTTCATTTCCATTTCCTCCCCTTGACCCAATGGACACCACACCAATCTGGGTGAGGTCCAGCAAGGAAGGGTCACTGAATGCCCTTGGTGACGCTCATACACCTCCCACACCCAGCTCAAGTGCTTCAGATTCAACAGAAAGCTCTAAACCCAGTCAGTCAGGTGCTAATTCCATTACATCACCTGATGATACTTTAAGTTCAGTAACTGTTCCTTCCACTAATGGCATGATCACAACAAGGGATAATTCAGTGGACTCTTTACCAAGTATTACGAGCACAACCAGTAGCGCAGAATCTTTGTCCAAGAACAAGTCTCATAGGAAAGGAATCAAAGGATCTATTGGACGCATTTttggaaataaaacaaagacTAAACAAAAGGACTCTGCGGGGGTTCATACAGACTCTTACTCAATGTCCAGTGAACCAGTTCCAGGGTCTACAGGGCAGAGAGAATTAGATAGGAGAATAAAAAATAAGTCGCATCTGTTAGCAGAAGCATTAGAAGCTGGGACACCTTTCGCTTTGTGGAATGCACCTACAGTTGTGGCTTGGTTAGAGTTGTGGGTGGGTATGCCTGCCTGGTATGTTGCAGCTTGTAAAGCAAATGTCAAGAGTGGAGCAATCATGTCGGCTTTGTCAGATACTGAGATTCAGCATGAGATTGGGATATCCAACCCTCTTCATCGTCTTAAGTTACGACTTGCCATTCAAGAGATTGTCACCCTTACAAGTACATCTTCACCTACAACCAACAGGAATTCTTTAGTCTATGGTGAAATGAACCATGACTGGATTGCCAATGAATGGCTACCAAGTCTGGGACTTGCTCAGTACAAGAGTACTTTCCAAGAATGTTTAGTAGATGCAAGAATGCTGGAGCACATCAGCAAGAAGGAATGTCAAAAGTATTTGAAAGTAGTTGATGGTTTTCACAGGCACAGTTTACAATGTGGTGTCAAATGTTTAGGATTTATGAATTATGATAGACGGTTGCTagaaaaaagaaggcaaatgtgTGAAGATGAAGCTAAAGATGTGCTTGTCTGGAGTAATGAACGTGTAATTAAGTGGCTAAGAAAGATTGGACTATCAGAGTATGCTGATAATTTGCATGGCACAGGAGTTCACGGTGCTGTGATCGCATTGGATGAGACTTTTGACTTCAGTACTTTAGCGTATGCTCTACAGATACCCAGTCAGAACACACAAATACGTCAAATTCTTGAACGGGACTTCAACTGGCTCCTGGCAAATGCTAGTGACAGAGAAATTGTAGATGAACTGGGCAATGGGGGCGACTTCAAACGCTCCAAATCCTGGCGGAAGATGTTTAAGCAGCGAGATAAAGGAAAAGACAAGGCCAGAGACAAAGAGCCTGCACGAAAGAACTCTTCAGGATCTGAGTCATCTCTCAGCCAATCGAGTGTGAGCTCATCTCCAAAGCCATCATCTAAAAATGCCAAACATAACAGCCACAGTGACAATAAAGATGCTGTGATCACAAGTGGCAATCTTGCGTAGCAGTGCAGCGCCATTCAGTCAGTTTGGTGTCAAATCCATTGGGGAATTAAAGTTAACCGCTGTATCAAGTATGCTTAAATTATaaatttactttctttttttttttttttcatttaaacaagGCTATTGGTATTGCCAGCTATAGTCATTTTTAGTGCCCAATGGTTTTGGAAtttaaacaaaagatttatTATGTGAAGCAATTTGTGCGGGATTCCTTGGGACCAAATATTTTGAGCTCCTACAAGGGTGGAAAGTTTCTGTGaatttctatatatatataatggACAGTGCCTGACTTGTGAATATGATTACTGCTGTCAGGATAATAAATTAAGTAATGAAAATTAAGCGGACGCCGCTCTGTGGGCCATCAGTGGACACAATTGGTTTTTTCAGCCTTTCATTCCAGTACTCAACAGTCACTGGTTTTGAGGAAAAATTTGGTGTGATCTTGTAATAGTTGCCTTgtcagttttcatttttatcgTTAGGATGAACTGTAGTTATTATCAATTTCTCGTTTTTGGAAAGAAACTTTTGGTTTGTGCTGTATGCGTTAGACTTGAATTCTCCAGTGTTCCGTAACACTGCAGTTTATGTTGTAGTTTATAAAGAAAATATCGTGTGCCAGGTATTGTTGGCGTAGCCACGTACGTGGACAACATGACCGGTAGAAATGTGGTAGAGTTGATTAGAATTTCGTCATTATCCTTCACGACTGAAAATTTCCTTCAAAAACTGAAAGCTGCTGAAAGCCAAGTCAGCTAATTCCACTAGCAGCCACAGGCGTGTCTTTACAATGACATATGTGCATACTGTGAGACAATTTTATAATAAATGGAAGAATTAATTGTACTGTTTCGAATataaatgaattaataatgCCCTCCGATAAAGGAGGCACAAAGTATTACATCATGAAGTTTGACCACATTTGGCTTGGCACGTGATTGATGCCAAGCTATTGTGCAATAGTTATTACAGCGTTAGTATATAGTTAGTACAGTTTTATAGCAATGGAATGATTTGATGGCGTTAGGGTTGTTACCAGCGCGTTTTCCCCATTCGTGTTTCTCCTTATATACTTTTCTGTTAAGAATTGTTCCGGCTTTTTCTAGTATTGAGTAAATTTTGGTCAAGTTTCTAATTtgtacagattttttttttcattaaaagacGAGACGACGTCACAATTTTGCACGCAGGTATTTGTCTCccttgtttgcttgctttttcgtaaattaatgaaaaacaaataagATCTTACATTTATGCCAGGCACTGTGCCTTTAATACTTCGTTCGACCGTATTCTTTTTGGAGTTAGCCATGTTTTGCGCTCTTCACAATTTTGCCGTTATGAGTAGTCAACTGGTTCGTTTATTTTCTGGCACCGGCGACATGCAGATTAGGTAGTGCTTTTGTTTCGGGTAGcaaattgtattttttactAGCTGTACTTACTGTGGCCTAGGCGTAACATGAAGTGTTTAGGTTACGTTGTAGGTCAGTAGGCTTTAAAATAAGATTGCGTACCACAATAATCCGAAACCATCTTAGATCTTATCCAGAAATGACTGTCATGACTTTAACTGAGCTTGCCAAGAAATCAGTGACAAGGTATTCTAGGAAGTTTTTCCGTTTCGGTTTAAAAGGCTTACATCCGATTTTACTGTTGTACATTAACCCCGGGTTTTTCAAGAATGACTCGCTGGTTGTGATCCGCCCATCATTATTCACCTATAATCACAAAAAAGACGCAGGGATGTTGTGGATCTTCAAGCTTTTTACGATTGTTTATATCTCGGGTCAATCATGATTCACTGCCTATGATTCGCCTGTCATGATTCGCCCAAAATAATCTCAGTAATTCGCATGGAATGCGTTTACTGAGGGAATACTAACTTCTcgaaatacaaaatttaaaaaacgtgGAAGATCTGCACATTTCTTTTAACGTTCTGTGTCAGGATTATCAGCGAATCGTGTTTGAAAAACCTGGGTGTTAATCGTACAAAGTGAGAAGATTTGGCTGGGAGCCATGACTCATTTTCCCAACATTGTCAACAAAAATAAGTCccgaaatctttttttttctgatcatAACACGACCCTAAGGCTTCACGCAAATACTTTTTGCGACCTCATACTTATCGTAACACGGTAAGCTAATCAGTCAATGGTGGTCGTTTCTGGGTGAGATCCTTTAAATGGACATTTGATTTCTACACGTaattaaagaaaacattttCGGATAAAGTAACCGTaaaggataattttttttttaaccgactcAAGTGGTTTTCTTGGAggtagaaaagaaaattttgttCTCAGATAAAGCGCACTTCGTAATAGCAAATCATGCCTAACTCATACTCGAAAATACTCTTGGaaggaaaaaatgttgaaagCTTTAATAAGCCAGTTGACAGTGTTTTACCAGAATTCAAGGTGCCCTATcgttcatttttcattgttttctacGTGGTAATATTTAAAGATGAATCTTCTAATTTGGAACTGAAGTTCAAGAATATTTGCCAGATTTCTAGAATGTTTGGCAAAATCGTCAGAATAGAGTCCTTTCAAATAAATGAATACAACAAACACTTTTGTACCAAAATTGAAGAAAGTTGCTAGTCTGGCGAAAGACATGATCAACAAATTCAGTCAACTGGATGTTCCCCAAGTATTAAACACGAAGGAACAGTTTGTATACTTATAATAGCGTTCTCTTTGGAGTCGACAGAATTGTGACAAATTCAAACTACTCAAGCTGTTTTGTACGAATCCAAACAACCGCCAAACTGCCTTGTTCTACTGAAGACTCGTGCGCCTTCTTCTATCGTCTCGTAAGAAATTCACCTCGGTATTGAACTAAGAATAGAGTTGTATGCTATTCACAATTTGCTGGAATTGCATTAAGCAGTCACAAGTATTACTATGAATTGCCTAAGGAAGTATTGCTACTAGGGAGACGCCCACCAAACAAAGGACTCATCAATTGCAGACTGGGAAGTGAATTTTTGATAGCATCTGGTTCATGCAAACATTAACTGAATGGTTCcagcttttctgtatttattcaCAAATGAGAACAACGTTCTTCTGTTTTTCGTTTCTGTGTATCAATTTGTAatatacgaaaaaaaaaaaactttgtttacCGTAACGTATATGTAACCAAATACCAGAAACTTGAAATACAGTTATATTTTAGTAAATGTGGTCTCCGCGTCTTTGAGATTAACGTACTTTTGGTGTGGGTGAAGTTGTAACCTGGCGCGCTTAGCACTGACATGAAAACTTCCCGCCTAGAGAACGTGCACAGTTCTGTTGCTCTAACAAGTGACTTGGGACcgaaacaaatttttaaaacttgCGAAAACGGGAATTTATAATGGCAATGTGGTAGCTGTGATCTCGTCTATCGTAATTTTTGCAGGAAGCATGCAGGTAGGATCATTTTGTCTGACACTTCTTTGGGATTATTCTTGGCCCCAGATCTcgttctggccccagttgttcaaaggctggataactttatccactggataaatcactgtCCAGCGGATAAAATGTATTGATTAGAGTGcattttatccgctggatagtgatgtatccagtggataaagttattcaacctttgaacaactgggccctgctGGCGAGAGGCTTGGGAACGAGGTTAGTCTGGTATCTCAACCATAAAAATCGTGGGAGCGTCTAAAGCCGTGATTAGACCCTAACCTACACGTGCTGTCGCTTTGCTAAGGGCTCTCTGTTTCCGGCTGGCAAGGGATTCTCTCTTGTCTCGTACATTTTAATATAACTATTGTATTTTCATCTTTACACAGTCAACTTTGCTAGTAATCCTTAAAGTAATCATCTTTTTCATATCAGTTGCTAACTACAGACTTCGTATGGAAAAAATCAATAGCTACATCCCTGTGCCGTTAATTTAAAGGAATCCTTAATTGGGCCTCGTGAAGCCCAAGTGGACCTAGCTAAGGCTAAATCGAGGTTTAGACGAGGACTCCAAAAGCCTTGGCTAAGCGGAGTCCAAGAGTGTGGCTGTTGGTTGGAAGAACATCATCCTTGCTTTCCTATTATTTCTTTTAGCAAAAGCGTTGTGAATTCTTtacgaaaaaaaataaatcaaatggGATGGGCAATTAATATTCTGCCCAAAGTTTGGTGCCCAAAAGCTTTGCATGAAATCTCTTTCACTAGTTTGAAAGGTATTTCTTTGTTTCCCGCCACAGTACGCGATTTgtgtacttgtttgtttgtttgtttttttcttgctaTAACGTCTACTCCTCTTTCTGTAACTTGCTGGAAATAACGAAAAtgaattattttctgtttttgaaCCATCACGGGCCCGGCCAATCGagttcaacatttccattcaggAACACGCGACAtgcattgttgaattcaacagttatctttctttataatttttaaGTGCCGTTAATTTGAGTTATAACacctactgacgattcacaattcacttgactctgatgatgactcccgctcaggttgtcgaaaagTAAGTCAATGCCACCACGAACAGACTACATTCACCCGAATGATCATACTTGACCGACTTATATGACTCctggttcaaaccatttacattgTTGAATTCGGCACAGTAagaacggtgcctcctaataaagatgtatttttgcaaaggttttgaCTACGGGGAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037620 all species →	Domain	Liprin-alpha, SAM domain repeat 1	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR037621 all species →	Domain	Liprin-alpha, SAM domain repeat 2	Interproscan
IPR037622 all species →	Domain	Liprin-alpha, SAM domain repeat 3	Interproscan
IPR029515 all species →	Family	LAR-interacting protein, Liprin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12587 all species →	LAR INTERACTING PROTEIN LIP -RELATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0048786 all species →	Cellular Component	presynaptic active zone	Interproscan
GO:0050808 all species →	Biological Process	synapse organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26226	PPFIA; liprin-alpha	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_000400-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

84TPM > 0

7Conditions

349.4Max TPM

160.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	20	178.28	234.04
holobiont · low.pH Control.temp	20	19	169.21	268.47
holobiont · control.pH_high.temp	20	20	178.30	349.39
holobiont · control.pH Control.temp	19	19	154.13	307.04
Whole organism	4	4	39.88	44.84
unannotated	1	1	22.95	22.95
live coral tissue/skeleton	1	1	36.01	36.01

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	234.04
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	226.70
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	212.78
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	212.13
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	205.96
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	200.18
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	196.16
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	192.36
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	190.86
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	187.82
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	185.95
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	179.04
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	178.71
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	163.20
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	162.50
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	144.57
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	142.08
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	123.59
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	118.70
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	108.35
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	268.47
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	249.69
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	237.75
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	237.52
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	199.77
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	196.45
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	186.62
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	182.27
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	181.84
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	177.26
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	177.06
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	171.28
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	163.51
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	162.29
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	133.84
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	115.71
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	114.93
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	114.07
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	113.94
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	349.39
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	291.26
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	289.49
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	253.94
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	244.88
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	213.46
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	195.66
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	189.62
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	184.18
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	178.78
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	177.95
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	154.52
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	153.35
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	124.79
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	118.55
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	105.67
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	102.70
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	92.07
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	90.00
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	55.78
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	307.04
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	263.46
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	258.05
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	192.27
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	183.39
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	169.45
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	148.26
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	147.24
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	143.50
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	143.04
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	136.77
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	136.64
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	105.07
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	103.95
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	103.94
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	103.90
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	101.61
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	92.91
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	87.99
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	44.84
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	42.38
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	38.27
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	34.02
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	22.95
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	36.01

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.