Gene detail

Detailed information of FUN_001067-T1 in Siderastrea siderea

Genomic Location: contig_1:16704237...16710167
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05241 all species →	EBP	EXPERA (EXPanded EBP superfamily)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033118 all species →	Domain	EXPERA domain	Interproscan
IPR007905 all species →	Family	Emopamil-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14207 all species →	STEROL ISOMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000247 all species →	Molecular Function	C-8 sterol isomerase activity	Interproscan
GO:0004769 all species →	Molecular Function	steroid delta-isomerase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006695 all species →	Biological Process	cholesterol biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016125 all species →	Biological Process	sterol metabolic process	Interproscan
GO:0016126 all species →	Biological Process	sterol biosynthetic process	Interproscan
GO:0047750 all species →	Molecular Function	cholestenol delta-isomerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01824	EBP; cholestenol Delta-isomerase	EC:5.3.3.5	Steroid biosynthesis	ko00100	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.