Genomic Location: contig_1:15340658...15364752
NR annotation: XP_020627001.1, uncharacterized protein LOC110064306 [Orbicella faveolata]
| CDS |
| FUN_001079-T1 |
| Transcript |
| FUN_001079-T1 |
| Protein |
| FUN_001079-T1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12872 | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF00567 | TUDOR | Tudor domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR025605 | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR041966 | Homologous_superfamily | LOTUS-like domain | Interproscan |
| IPR002999 | Domain | Tudor domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR050907 | Family | Serine/Arginine-Rich Splicing Factor | Interproscan |
| IPR035437 | Homologous_superfamily | SNase-like, OB-fold superfamily | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23147 | SERINE/ARGININE RICH SPLICING FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0016607 | Cellular Component | nuclear speck | Interproscan |
