Detailed information of FUN_001121-T1 in Acropora pulchra

Genomic Location: ntLink_6:8811185...8822911
NR annotation: XP_029190638.2, small subunit processome component 20 homolog [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75691Small subunit processome component 20 homolog OS=Homo sapiens OX=9606 GN=UTP20 PE=1 SV=3
Q5XG71Small subunit processome component 20 homolog OS=Mus musculus OX=10090 GN=Utp20 PE=1 SV=2
O60055U3 small nucleolar RNA-associated protein 20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp20 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002640 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20416
all species →		UTP20_CU3 small nucleolar RNA-associated protein 20, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046523
all species →		DomainU3 small nucleolar RNA-associated protein 20, C-terminalInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR052575
all species →		FamilySmall subunit processome component 20Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17695
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_001121-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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