Gene detail

Detailed information of FUN_001401-T1 in Acropora pulchra

Genomic Location: ntLink_6:11948193...11952267
NR annotation: XP_029199383.2, SIN3-HDAC complex-associated factor-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C8M1	SIN3-HDAC complex-associated factor OS=Mus musculus OX=10090 GN=Sinhcaf PE=1 SV=1
Q9NP50	SIN3-HDAC complex-associated factor OS=Homo sapiens OX=9606 GN=SINHCAF PE=1 SV=1
Q5RCB7	SIN3-HDAC complex-associated factor OS=Pongo abelii OX=9601 GN=SINHCAF PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006351 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15396 all species →	FAM60A	Protein Family FAM60A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026065 all species →	Family	SIN3-HDAC complex-associated factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13422 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016580 all species →	Cellular Component	obsolete Sin3 complex	Interproscan
GO:0030336 all species →	Biological Process	negative regulation of cell migration	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26090	SINHCAF; SIN3-HDAC complex-associated factor	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.