Detailed information of FUN_001406-T1 in Acropora pulchra

Genomic Location: ntLink_6:11989524...11992102
NR annotation: XP_015762603.1, PREDICTED: ELAV-like protein 1-B [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61701ELAV-like protein 4 OS=Mus musculus OX=10090 GN=Elavl4 PE=1 SV=1
O09032ELAV-like protein 4 OS=Rattus norvegicus OX=10116 GN=Elavl4 PE=1 SV=2
Q91584ELAV-like protein 3 OS=Xenopus laevis OX=8355 GN=elavl3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001601 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR002343
all species →
FamilyParaneoplastic encephalomyelitis antigenInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR050502
all species →
FamilyEukaryotic RNA-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48025
all species →
OS02G0815200 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:1990904
all species →
Cellular Componentribonucleoprotein complexInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_001406-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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