Detailed information of FUN_001498-T1 in Acropora pulchra

Genomic Location: ntLink_6:12984670...12993767
NR annotation: XP_029199502.2, uncharacterized protein LOC114964308 isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P09212Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus OX=9986 GN=SOD1 PE=1 SV=3
P23345Superoxide dismutase [Cu-Zn] 4A OS=Zea mays OX=4577 GN=SODCC.3 PE=2 SV=2
P23346Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays OX=4577 GN=SODCC.2 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001583 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00080
all species →
Sod_CuCopper/zinc superoxide dismutase (SODC)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036423
all species →
Homologous_superfamilySuperoxide dismutase-like, copper/zinc binding domain superfamilyInterproscan
IPR053257
all species →
FamilyCu-only superoxide dismutaseInterproscan
IPR001424
all species →
DomainSuperoxide dismutase, copper/zinc binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20910
all species →
AGAP001623-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006801
all species →
Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_001498-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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