Detailed information of FUN_001549-T1 in Acropora pulchra

Genomic Location: ntLink_6:13638547...13653604
NR annotation: XP_029200694.1, uncharacterized protein C5orf49 homolog isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6BLK0Large ribosomal subunit protein eL42 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=RPL44 PE=3 SV=3
P52809Large ribosomal subunit protein eL42 OS=Cyberlindnera jadinii OX=4903 GN=RPL44 PE=3 SV=2
A0A1D8PEV4Large ribosomal subunit protein eL42 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=RPL44 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007639 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00935
all species →		Ribosomal_L44Ribosomal protein L44FamilyInterproscan
PF15074
all species →		DUF4541Domain of unknown function (DUF4541)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000552
all species →		FamilyLarge ribosomal subunit protein eL42Interproscan
IPR011332
all species →		Homologous_superfamilyZinc-binding ribosomal proteinInterproscan
IPR053708
all species →		Homologous_superfamilyEukaryotic Ribosomal Large Subunit eL42Interproscan
IPR027901
all species →		FamilyCilia and flagella associated protein 90Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10369
all species →		60S RIBOSOMAL PROTEIN L36A/L44Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_001549-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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