Detailed information of FUN_001657-T1 in Dendrogyra cylindrus

Genomic Location: contig_2:1248670...1339348
NR annotation: XP_020620340.1, neuralized-like protein 4 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96A44SPRY domain-containing SOCS box protein 4 OS=Homo sapiens OX=9606 GN=SPSB4 PE=1 SV=1
Q8R5B6SPRY domain-containing SOCS box protein 4 OS=Mus musculus OX=10090 GN=Spsb4 PE=1 SV=1
Q5E9X6SPRY domain-containing SOCS box protein 1 OS=Bos taurus OX=9913 GN=SPSB1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003352 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622
all species →		SPRYSPRY domainFamilyInterproscan
PF07177
all species →		NeuralizedNeuralizedDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136
all species →		Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR000225
all species →		RepeatArmadilloInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR006573
all species →		DomainNeuralized homology repeat (NHR) domainInterproscan
IPR050672
all species →		FamilyF-box/SPRY and SOCS box protein familiesInterproscan
IPR003877
all species →		DomainSPRY domainInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR001870
all species →		DomainB30.2/SPRY domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12245
all species →		SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0019005
all species →		Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_001657-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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