Detailed information of FUN_001850-T2 in Acropora pulchra

Genomic Location: ntLink_6:16979648...16999633
NR annotation: XP_029192501.2, protein mesh-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
H9JIQ1Protein mesh OS=Bombyx mori OX=7091 PE=1 SV=1
Q9UGT4Sushi domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SUSD2 PE=1 SV=1
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000637 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084
all species →
SushiSushi repeat (SCR repeat)DomainInterproscan
PF03782
all species →
AMOPAMOP domainDomainInterproscan
PF06119
all species →
NIDONidogen-likeFamilyInterproscan
PF00094
all species →
VWDvon Willebrand factor type D domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436
all species →
DomainSushi/SCR/CCP domainInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR003886
all species →
DomainNIDO domainInterproscan
IPR005533
all species →
DomainAMOP domainInterproscan
IPR035976
all species →
Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR051495
all species →
FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13802
all species →
MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007160
all species →
Biological Processcell-matrix adhesionInterproscan
GO:0005615
all species →
Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_001850-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP