Detailed information of FUN_001908-T1 in Acropora pulchra

Genomic Location: ntLink_6:17646783...17655802
NR annotation: XP_044166918.1, proteasome subunit beta type-4-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3T108Proteasome subunit beta type-4 OS=Bos taurus OX=9913 GN=PSMB4 PE=1 SV=1
P28024Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis OX=8355 GN=psmb4 PE=2 SV=2
P28070Proteasome subunit beta type-4 OS=Homo sapiens OX=9606 GN=PSMB4 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006868 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227
all species →		ProteasomeProteasome subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR016295
all species →		FamilyProteasome subunit beta 4Interproscan
IPR050115
all species →		FamilyProteasome subunit alphaInterproscan
IPR001353
all species →		FamilyProteasome, subunit alpha/betaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11599
all species →		PROTEASOME SUBUNIT ALPHA/BETAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0010498
all species →		Biological Processproteasomal protein catabolic processInterproscan
GO:0019774
all species →		Cellular Componentproteasome core complex, beta-subunit complexInterproscan
GO:0005839
all species →		Cellular Componentproteasome core complexInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02736PSMB4; 20S proteasome subunit beta 7EC:3.4.25.1
Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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