Detailed information of FUN_001936-T1 in Colpophyllia natans

Genomic Location: contig_2:10316780...10338732
NR annotation: XP_020605252.1, complement C1q subcomponent subunit C-like isoform X3 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006052DomainTumour necrosis factor domainInterproscan
IPR050392FamilyCollagen/C1q domain-containingInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR021184Conserved_siteTumour necrosis factor, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15427EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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