Detailed information of FUN_001960-T1 in Siderastrea siderea

Genomic Location: contig_2:1892703...1906561
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16014
all species →		SAP130_CHistone deacetylase complex subunit SAP130 C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024137
all species →		FamilyHistone deacetylase complex subunit SAP130Interproscan
IPR031963
all species →		DomainHistone deacetylase complex subunit SAP130, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13497
all species →		HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070822
all species →		Cellular ComponentSin3-type complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19192SAP130; histone deacetylase complex subunit SAP130-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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