Gene detail

Detailed information of FUN_002079-T1 in Colpophyllia natans

Genomic Location: contig_2:12282522...12296772
NR annotation: XP_020607143.1, A disintegrin and metalloproteinase with thrombospondin motifs 18-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P58459	A disintegrin and metalloproteinase with thrombospondin motifs 10 OS=Mus musculus OX=10090 GN=Adamts10 PE=2 SV=3
Q9H324	A disintegrin and metalloproteinase with thrombospondin motifs 10 OS=Homo sapiens OX=9606 GN=ADAMTS10 PE=1 SV=2
Q5W7F4	A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Bombyx mori OX=7091 GN=ADAMTS-1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01562	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan
PF17771	ADAMTS_CR_2	ADAMTS cysteine-rich domain 2	Domain	Interproscan
PF01421	Reprolysin	Reprolysin (M12B) family zinc metalloprotease	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR002870	Domain	Peptidase M12B, propeptide	Interproscan
IPR041645	Domain	ADAMTS, cysteine-rich domain 2	Interproscan
IPR001590	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan