Detailed information of FUN_002206-T1 in Acropora pulchra

Genomic Location: ntLink_6:22410014...22415779
NR annotation: XP_015763635.1, PREDICTED: uncharacterized protein LOC107342648 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000232 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02017
all species →
CIDE-NCIDE-N domainDomainInterproscan
PF04905
all species →
NCD2NAB conserved region 2 (NCD2)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003508
all species →
DomainCIDE-N domainInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR019786
all species →
Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR038398
all species →
Homologous_superfamilyNAB co-repressor domain 2 superfamilyInterproscan
IPR006989
all species →
DomainNAB co-repressor, domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
No PANTHER signature was detected for FUN_002206-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0006915
all species →
Biological Processapoptotic processInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0045892
all species →
Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_002206-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP