Detailed information of FUN_002639-T1 in Acropora pulchra

Genomic Location: ntLink_8:4570892...4572604
NR annotation: XP_015747213.1, PREDICTED: uncharacterized protein LOC107326980 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001346 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12534
all species →		Pannexin_likePannexin-like TM region of LRRC8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051644
all species →		FamilyTRAMP complex component and AT-rich DNA-binding proteinInterproscan
IPR021040
all species →		DomainLRRC8, pannexin-like TM regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46543
all species →		ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0031499
all species →		Cellular ComponentTRAMP complexInterproscan
GO:0043629
all species →		Biological Processobsolete ncRNA polyadenylationInterproscan
GO:0071031
all species →		Biological Processnuclear mRNA surveillance of mRNA 3'-end processingInterproscan
GO:0071035
all species →		Biological Processnuclear polyadenylation-dependent rRNA catabolic processInterproscan
GO:0071036
all species →		Biological Processnuclear polyadenylation-dependent snoRNA catabolic processInterproscan
GO:0071037
all species →		Biological Processnuclear polyadenylation-dependent snRNA catabolic processInterproscan
GO:0071038
all species →		Biological ProcessTRAMP-dependent tRNA surveillance pathwayInterproscan
GO:0071039
all species →		Biological Processnuclear polyadenylation-dependent CUT catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_002639-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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