Detailed information of FUN_002648-T2 in Acropora pulchra

Genomic Location: ntLink_8:4732901...4760914
NR annotation: XP_044182531.1, A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000296 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00264
all species →
TyrosinaseCommon central domain of tyrosinaseDomainInterproscan
PF00090
all species →
TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008922
all species →
Homologous_superfamilyDi-copper centre-containing domain superfamilyInterproscan
IPR000884
all species →
RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR052065
all species →
FamilyComplement and asymmetry regulatorInterproscan
IPR036383
all species →
Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002227
all species →
DomainTyrosinase copper-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906
all species →
PROPERDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_002648-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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