Detailed information of FUN_002863-T1 in Colpophyllia natans

Genomic Location: contig_3:8995942...9006540
NR annotation: KAJ7334472.1, hypothetical protein OS493_014789 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9PV24Fibrinogen alpha chain OS=Mus musculus OX=10090 GN=Fga PE=1 SV=1
P06399Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3
P02671Fibrinogen alpha chain OS=Homo sapiens OX=9606 GN=FGA PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01463LRRCTLeucine rich repeat C-terminal domainFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00088TrefoilTrefoil (P-type) domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000519DomainP-type trefoil domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050991FamilyExtracellular Matrix Regulatory ProteinsInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46708TENASCINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030155Biological Processregulation of cell adhesionInterproscan
GO:0031175Biological Processneuron projection developmentInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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