Detailed information of FUN_003481-T1 in Dendrogyra cylindrus

Genomic Location: contig_3:6137915...6146648
NR annotation: KAJ7340133.1, Ribosomal RNA-processing protein 7 A [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O88783Coagulation factor V OS=Mus musculus OX=10090 GN=F5 PE=1 SV=1
P79385Lactadherin OS=Sus scrofa OX=9823 GN=MFGE8 PE=1 SV=2
Q0V8S9Contactin-associated protein-like 5 OS=Gallus gallus OX=9031 GN=CNTNAP5 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002301 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR050633
all species →		FamilyNeuropilin/Multicopper Oxidase/Coagulation FactorInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46806
all species →		F5/8 TYPE C DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_003481-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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