Detailed information of FUN_003680-T1 in Acropora pulchra

Genomic Location: ntLink_8:14385446...14386793
NR annotation: CAH3043922.1, unnamed protein product [Porites lobata]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010396 (this species only)
Transcription factor familySRF · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319
all species →		SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002100
all species →		DomainTranscription factor, MADS-boxInterproscan
IPR036879
all species →		Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for FUN_003680-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_003680-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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