Gene detail

Detailed information of FUN_003933-T1 in Siderastrea siderea

Genomic Location: contig_3:6824165...6828794
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13410 all species →	GST_C_2	Glutathione S-transferase, C-terminal domain	Domain	Interproscan
PF13409 all species →	GST_N_2	Glutathione S-transferase, N-terminal domain	Domain	Interproscan
PF14736 all species →	N_Asn_amidohyd	Protein N-terminal asparagine amidohydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040079 all species →	Family	Glutathione transferase family	Interproscan
IPR026750 all species →	Family	Protein N-terminal asparagine amidohydrolase	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR045073 all species →	Family	Glutathione S-transferase Omega/Tau-like	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR005442 all species →	Family	Glutathione S-transferase, omega-class	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12498 all species →	N-TERMINAL ASPARAGINE AMIDOHYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0008418 all species →	Molecular Function	protein-N-terminal asparagine amidohydrolase activity	Interproscan
GO:0004364 all species →	Molecular Function	glutathione transferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00297	metF, MTHFR; methylenetetrahydrofolate reductase (NADH)	EC:1.5.1.54	One carbon pool by folate	ko00670	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.