Detailed information of FUN_004286-T1 in Acropora pulchra

Genomic Location: ntLink_8:21529399...21533427
NR annotation: XP_015748220.1, PREDICTED: nucleolar complex protein 4 homolog B-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NU91Nucleolar complex protein 4 homolog B OS=Xenopus laevis OX=8355 GN=noc4l-b PE=2 SV=1
Q6NRQ2Nucleolar complex protein 4 homolog A OS=Xenopus laevis OX=8355 GN=noc4l-a PE=2 SV=1
Q5ZJC7Nucleolar complex protein 4 homolog OS=Gallus gallus OX=9031 GN=NOC4L PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008135 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03914
all species →		CBFCBF/Mak21 familyRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027193
all species →		FamilyNucleolar complex protein 4Interproscan
IPR005612
all species →		DomainCCAAT-binding factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12455
all species →		NUCLEOLAR COMPLEX PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030692
all species →		Cellular ComponentNoc4p-Nop14p complexInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan
GO:0042254
all species →		Biological Processribosome biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14771NOC4, UTP19; U3 small nucleolar RNA-associated protein 19-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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