Genomic Location: ntLink_8:22908314...22915199
NR annotation: XP_015755724.1, PREDICTED: endo-1,4-beta-xylanase A-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_004402-T1 |
| Transcript |
| FUN_004402-T1 |
| Protein |
| FUN_004402-T1 |
| UniProt accession | Description |
|---|---|
| A3DH97 | Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1 |
| F4JG10 | Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1 |
| A0A1P8AWH8 | Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004413 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00331 all species → | Glyco_hydro_10 | Glycosyl hydrolase family 10 | Domain | Interproscan |
| PF01822 all species → | WSC | WSC domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001000 all species → | Domain | Glycoside hydrolase family 10 domain | Interproscan |
| IPR002889 all species → | Domain | Carbohydrate-binding WSC | Interproscan |
| IPR017853 all species → | Homologous_superfamily | Glycoside hydrolase superfamily | Interproscan |
| IPR044846 all species → | Family | Glycoside hydrolase family 10 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31490 all species → | GLYCOSYL HYDROLASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004553 all species → | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
FUN_004402-T1.
