Detailed information of FUN_004439-T1 in Acropora pulchra

Genomic Location: ntLink_8:23248133...23252585
NR annotation: XP_029184717.1, sorting nexin-7-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CE50Sorting nexin-30 OS=Mus musculus OX=10090 GN=Snx30 PE=1 SV=1
Q5VWJ9Sorting nexin-30 OS=Homo sapiens OX=9606 GN=SNX30 PE=1 SV=1
Q28E02Sorting nexin-30 OS=Xenopus tropicalis OX=8364 GN=snx30 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007766 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_004439-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45949
all species →		SORTING NEXIN-4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000407
all species →		Cellular Componentphagophore assembly siteInterproscan
GO:0000422
all species →		Biological Processautophagy of mitochondrionInterproscan
GO:0005769
all species →		Cellular Componentearly endosomeInterproscan
GO:0015031
all species →		Biological Processprotein transportInterproscan
GO:0032456
all species →		Biological Processendocytic recyclingInterproscan
GO:0034727
all species →		Biological Processpiecemeal microautophagy of the nucleusInterproscan
GO:0061709
all species →		Biological ProcessreticulophagyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_004439-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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