Gene detail

Detailed information of FUN_004513-T1 in Dendrogyra cylindrus

Genomic Location: contig_4:6306279...6316858
NR annotation: KAJ7386688.1, Post-GPI attachment to protein factor 3 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_004513-T1

CGTGCATGAATATTTGACTTTCCACCAAATACCAACAGAATCCGTTCCGCGATCGCGTTTGGTTTCTGTTTAAAAATATGCTActtgttaaaaaagaaataattgacTGAATCGTGTAACTCTTTTATTGGAGTTGTGAACTATCCAAGTGTCAGAGGCATAGTTAATTTTTGAGAGAAGAATATTTACAAGGAAATGAGCTCTTTCATGATGTTCTTACAGAGCAGTATTTTGTTAGCTGTTTTGTTATGGAACCCAGTGAGAGGATCCAAAGGAGACAGAAGTTTGGAGTTTCGCATATGTATGAAGGAATGTTCTAAGGGATGCCAGCTGAATGAATACCCTGGCAAGTTGCCGATATACTTGACTATATTTTGGTGGGATTGTACAGATGAATGCAAGTACCAATGTATGCACAAGGTCACTGAGAGTAATGTCAGAaacaataaaccaatcaaacagTTTTATGGCAAATGGCCATTTATACGGTTCCTTGGAATTCAAGAACCTGCTTCAGtcttattttcaattttcaatggAGTTGGACATATCGCTGGCTGGAGAATGTTTAAATCTACTGTGCCTAACACTGACTACAACATGTATTCAGTGTGGAAAGTAAATCTTGTGGTTAGCGTAAATGCTTGGTTCTGGTCAATAGTATTTCACACTCGGGATTTAAACTGGACTGAGAAAATGGATTACTTCTGTGCTACATCTCTGGTTATGTACTCACTGTTTGCTTGCCTTGTGAGGTTTATCGGACTGGAAAATAAATGGAGCTGTTTTGCCGTTGGATTACTCCTCTGCTGTCTTTTCTGCAGCCATGTTTTCTATTTGGCCTTTATAGATTTTGATTATGGATACAACATGAAATTTAACGTAACAGTAGGTATCATCAACATGTGTAGTTGGCTGAGCTGGTGTTGGACAGTAAGttgtttacagagtacttcatgtcctactgggcttttagacattttcatatacttcatgtttgatataattttgtgtgttttggtgggatttcattaatgaggacactttgtgatgcctattatgaggaacatgaatctcattaccgtgcatttctggacatatctgagTGACTCGAACGTGTGTAAAGGCAGGAAAGCTCAAGTGTCAATTTAGTAGAAGAACTTACAAGTATGTTGTACACGATCTTATTTTTGACAATGAGGCGTCAAAAAGACAGCAGTCAAACACAAAACTGGGATGCCATGGTTAAGATTATCATATGGCCTTGAATTTTGTTAGAGTTTGAAGAGCTATGTGCAATAGGTTTTTTTCCAGGGAATGGAAGGACGTGCAGTGTATCATATCATCTCACCACAACGACTTAATTTTCTTGCAGTATTACAAGCAACAACCCTACGTTTGGAAATGTGCTTTAGTGACAGTCGGCGTCTTTCTGCTTTTAGGTCTTGAGCTGGGTGACTTCCCACCAATTCTGTGGACATTTGACGCACATTCGTTATGGCATCTCGGAACAGCGCCACTCTGTTACGTCTGGTACAGCTTTCTGGCGGACGATGCAAAGCACCAACTAATCATGAAAAGAAAGCTAAAAAAGAGCTCTTGAGGGCTGCCATTACCTAAGTTTTTAGTTAACTGATCTACTATAAGGATGCACGTTTACGAATAAACATTAGCTCAGCTCTGTTGCAAAACAGGATAAAAGCGCGCAGTAGTTATTAATAAATaggtttattatatggctacaatagtacgcgcgctctgattggctggtgagcgggcaagattttcttgtaatgaccaggcattatgaaaatttttcttgccttagctttttataactttttaagggtcaaacactggtaaacagaggtcagtttgttttgtaaaaattaaagtggttaaatttgccctagatcttggcgtaatgaattcaaaaattgcctcattgtcagagaaatcgtttcttctggtttcgatcgcatgacctcgcGAATGACcacttgcgcgcgcaagcggatattgaaaaacgtttccctttttttcaacgctaaaaaggccatataataaataacttattaacctcgtccgttcggtcattacagggaaatctcagacctcggccttgatgtattgaccttgctatcgctcggtcaatacatcaaggtctcggtctgagatttccctgtaatgacctcactctcggttaataagtagtatataacgAAGTATTAGGAATTAATGACTGCTAAGAAATTGAAGGGTTAATAAGCCACAAACTGTAGCGTACATGCATTCTGTTACTATATCAGTCCATCCATTCGTTCGTTTCTACATGTAAGCTTTTTCTAATCAGTGTGAACGTACCCTAGGTTTGATTATCGGCCGCTGTTCAGGTAAATGAAATCGAGTTTAAATGGAACCACGATTTATAGTACATACACAAATTTACACAGCTCCCTAAGTTAAGATTGTCAGTGTGTGCAATATGGCAGTCTATAGTTGTTAATATTATTTCTGTATTTAAATTGGATAACAATTTTATCAAACTTTATCTTCACTGAATGATTTCTgctacaaaataaaataagtttTTTAAGGTGAAGCGAAGTCAAATTGAGGatgaatgtaattttttttaaataaaagccTTCTGACTAAGGAATTCTAATGCtgtatttgttttaaaaagcagta

Protein

Uniprot

Uniprot term	Description
A8WFS8	GPI-specific phospholipase A2-like PGAP3 OS=Danio rerio OX=7955 GN=pgap3 PE=2 SV=1
A2A559	GPI-specific phospholipase A2-like PGAP3 OS=Mus musculus OX=10090 GN=Pgap3 PE=2 SV=1
A7YWP2	GPI-specific phospholipase A2-like PGAP3 OS=Bos taurus OX=9913 GN=PGAP3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04080	Per1	Per1-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007217	Family	Per1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13148	PER1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006506	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0031227	Cellular Component	obsolete intrinsic component of endoplasmic reticulum membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23553	PGAP3, PER1; post-GPI attachment to proteins factor 3	-	Membrane trafficking	ko04131	deepkoala