Gene detail

Detailed information of FUN_004520-T2 in Acropora pulchra

Genomic Location: ntLink_8:24018528...24020620
NR annotation: XP_029184873.1, UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_004520-T2

CCAGAGAGTTGCTGTAGATCTTGGGGTCGATGGATAAATTAATCTGTACGTTGAACACCTCTTTGAAGCTATGCCTTCCTCCCTTGAAGACTCATAATTTATTTACGTGAACTCTGTGTGTAAAAATAACTTTGTGTCCACATGAAAATGGCATTTAAAATGATCTTTGGGATCCAAGGAAGGCAGATTTAATGTTGCATTGTAACTGCAGTTAAGCTGCTTACACTCAACTGTCACTGATTTGAAAATTGTATACTTGTATCAGACCAATTGAATTAAACCTCCTCCACATTGGTGCCATAGCAAAATAATACAATATATATAATGATATTGATTAATTTGCGATGATATTAACATACTCATCCATATTCAATAGCCACTCTGACCAATCACATGAATTTCTCGAGATGCGTGAGTAAGTTGTCATACATAGTAATTTGCCCAACAAACCTAAAAGCCTGGGGAGAGATTTGAAAGTGGTCCCAGGGAAATAGCAGGCTGAATGTATGAACAATGGAATACAAATGAACATGAAGCATTAAATAATGGCACTAGTGCAGGCATTATATAATGCTTCATGTTGTTGTTGCGTCCCTGGTAGCCTTTGGAATTAAGTCTTCCAAGTCTTTTTTCTCTTGCTCTTCCATCTTTGGCGGCCTAAAGTTTTATTTTGAAGGCATATTGTTTCTTTTGTTTTGAAGGCATGTTGTTCTTGTTTCAATTATTATCGTACATCACTGAACTGCATTTCTTCAATCCCCAGGTGAACTGAGCTAGACCACCTTTCACAAAGGATTAAATTTTTTTCCATAACAATTGGTCAAAATGGGTATTGAATATGTACATGTTTTATCAGATTTAAAATTTATATGTGATAAAACACTCCTGCTTGTGTATTAAGTAGTTAATAGCAATGATAATAATAATAATAATAATAATAATAATTTCCGCATTTCACTTAAGGGGGCCATACCACTGAAATGATGAGACTTGTTGGATCACTCTCTCCATATTACAAACCACGGATTTATGTGTTGGCTGAATCTGACAGAATGAGTGCTGAAAAAATTGTTAATTTTGAGAAAATCAAGACAGACAGAAGCAGTTCTGAGTTTAAAATTCTTAGAATTCCACGTAGTAGAGAAGTGCACCAATCCTGGCTCTCCACCATCTTAACAACTTTAAATGCAGTTTTCTTTTCTTTTCCTCTTGTATTTGGTGAAAAGCCTGATTTGGTGAGTATGGTAAATTCAGTTCTTTACATGTAATATTTACTTAATGCCTGCTGGTAGATGTCCAATATATGACATCCCGGTTTGATATAAAATCAGGAAACAAGACTGACAGATTAATGTAAGGAGCTTTTGAGATTAAAACCCATCATACTTATTAGTTTTATTATTGTAACCAGTCATATACAAATTATGAACACATGAGTAACATGAGTATAAGCAATTCTGGAAAGATGTGTGCAAATTTGTCTAAATGCATTAATGATTAGATTGGATAAAGTTTCTTATTTTTACAGGCTTATAAGCTGTTTTTTTCTGGATTTTTTTCTTTCAGTTAAATAATAAAGTGCAGTCATTTTTTTCTTTGCAGCTTCTTTGCAATGGCCCAGGGACATGTATTCCAATATGTCTAGCAGTCTTTGTATTAAAGGTCAGTTTTTCCCTTTTGGGGCTTGAACCACGATGCATGCTTAAATATTTGACTGTGTGATTTGACACATTTGGCAATAATGATAAGCTGAAAGAATTTAGGACCTTAATAAGCCTTGATATGATAATGTGTTAAGAGTACTGGAGGTTTAATTAATCGCCAAAAGTCTTATGCTGACATTGCACTGATTGTAGCACCAGTGTAGCCTAGGTAACCCTTGAAAACAGAGATGATTAAAAACACAAGCCTAAGGATGAATGGCTTCCATCAGCACTCTTGCACTCTGTGCCATCGTTTTTTATGTTCAAGTTCACCACAATAATAATAATAATAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6AY85	UDP-N-acetylglucosamine transferase subunit ALG14 OS=Rattus norvegicus OX=10116 GN=Alg14 PE=2 SV=1
Q96F25	UDP-N-acetylglucosamine transferase subunit ALG14 OS=Homo sapiens OX=9606 GN=ALG14 PE=1 SV=1
Q9D081	UDP-N-acetylglucosamine transferase subunit ALG14 OS=Mus musculus OX=10090 GN=Alg14 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008918 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08660 all species →	Alg14	Oligosaccharide biosynthesis protein Alg14 like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013969 all species →	Family	Oligosaccharide biosynthesis protein Alg14-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12154 all species →	GLYCOSYL TRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006488 all species →	Biological Process	dolichol-linked oligosaccharide biosynthetic process	Interproscan
GO:0004577 all species →	Molecular Function	N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity	Interproscan
GO:0043541 all species →	Cellular Component	UDP-N-acetylglucosamine transferase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_004520-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.