Gene detail

Detailed information of FUN_004542-T1 in Colpophyllia natans

Genomic Location: contig_5:8099908...8106143
NR annotation: XP_020628206.1, uncharacterized protein LOC110065410 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9FZ84	Small ribosomal subunit protein mS86 OS=Arabidopsis thaliana OX=3702 GN=RBG6 PE=2 SV=1
Q32P51	Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens OX=9606 GN=HNRNPA1L2 PE=1 SV=2
Q9LKA4	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11176	BOULE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003730	Molecular Function	mRNA 3'-UTR binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008494	Molecular Function	translation activator activity	Interproscan
GO:0045948	Biological Process	positive regulation of translational initiation	Interproscan
GO:0070935	Biological Process	3'-UTR-mediated mRNA stabilization	Interproscan