Detailed information of FUN_004630-T2 in Acropora pulchra

Genomic Location: ntLink_8:25087851...25117435
NR annotation: XP_044172650.1, uncharacterized protein LOC114954123 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15485Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2
O70165Ficolin-1 OS=Mus musculus OX=10090 GN=Fcn1 PE=1 SV=1
O70497Ficolin-2 OS=Mus musculus OX=10090 GN=Fcn2 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000019 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07534
all species →
TLDTLDDomainInterproscan
PF00059
all species →
Lectin_CLectin C-type domainDomainInterproscan
PF00147
all species →
Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00754
all species →
F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006571
all species →
DomainTLDc domainInterproscan
IPR014716
all species →
Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373
all species →
FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR001304
all species →
DomainC-type lectin-likeInterproscan
IPR033992
all species →
DomainNatural killer cell receptor-like, C-type lectin-like domainInterproscan
IPR016186
all species →
Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR002181
all species →
DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR000421
all species →
DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036056
all species →
Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR001759
all species →
FamilyPentraxin-relatedInterproscan
IPR030476
all species →
Conserved_sitePentaxin, conserved siteInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR020837
all species →
Conserved_siteFibrinogen, conserved siteInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143
all species →
FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005615
all species →
Cellular Componentextracellular spaceInterproscan
GO:0062023
all species →
Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_004630-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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