Gene detail

Detailed information of FUN_004677-T1 in Siderastrea siderea

Genomic Location: contig_3:17315107...17345795
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_004677-T1

atggcggCGAAAGAGGAAGAGGCCTTGACATATAGCCTTGATCATTTTGCTGAATTACAAGAAGTAACAGCGTTGATCGAGTCCATAGGATCTATATGCCATGATGACATCTTACTTGAGGCTGCAGAGGAACGCTTAATCGTTATTTTGAACAAATACCAAGAGCAACCACATTTACTAGATCCACATCTAGAATACCTAGTGCAGAAACTACAGTGTATTGTTCAAAATTCATCAAATCTTGCCAAAGTGATTCGCCAAGCCTTCAAATATCTATACCTCATTACCAAGGTTAGGGGACCAAAGTATGTAGTACGACTGTTTGCTCATGAAGTTGCCGATGTTGAACCAGTTCTAGGAATGCTCTCTCAGCAGAATCCCCAGGATCATGAGACTTGGGAGGCCAGATATGTGCTGCTGTTGTGGCTCTCAATTGTCTGCATGATACCCTTTGACATGGCTCGCTTTGATGGGCTCAAAGACGTTGCTGCTGGAGCAGTGGAAAGGCGCAGACCAGTTGTGGAAAGAATTCTTGAAACAGCTAAGGTGTATTTATCAGTTCCTGACAAGTCAAGAGATGCCGCAGCATTAGTTATTTCAAAGTTTGTAACAAGACCAGATGTCAAGAAAGAGAAACTGTCCGAATTCCTGGATTGGTGTTTGATTAGGATGGATAAGGCTGATGGTGAGACAATGAATGGCATGTTATTACTCACTGGGATCTTAACAACACTGGCCCTGCTCTTCAAGCATGGGAAAAGGGAAGACCTGATACCTTTTGCTCCCATAGTACTGAAGCAAACTGGAGCTTGTCAGATATCAAGCACAAACAACACCCTCCTGAGGAAGTTAAATATTAAACTTGTACAGCGTCTTGGTTTGACCTTTCTGAAGCCAAGAGTGGCAGCCTGGAGATATCAAAGAGGTAGTCGTTCCTTGGCATACAACTTGGCAAATCCGTTTTCTCAAGACCAGAGTCAAAGGCAGCAAAATACAGCAAATTCTAGCATGGAGAATGAAGAAGAATATGATGTCCCTGAAGAGCTAGAAGAAGTCATCGAGAAGCTTCTCGCTGGCCTCAAAGATAAGGATACAGTGGTTAGATGGTCGGCTGCTAAAGGaGTTGGTAGAATAACCGGCAGGCTTCCTCAAGAGTTAGCTGATCAGATCGTGGAAAACGTTTTAGAGTTGTTCAGTTTCAGAGAATCCGATTCTGGTTGGCATGGAGgaTGCTTAGCTCTGGCCGAGCTCGGCCGAAGAGGTCTTCTCCTACCAGACAGACTTCCTGAAGTTGTACCCCCTGTGCTGAAAGCTCTGTCTTATGATGAGATAAGAGGATCATACAGTGTTGGTAGCCATGTTAGAGATGGTGCTTGTTATGTTTGTTGGTCATTTGCCAGGGCTTATGATCCAAAGGAGATCCAACCACATGTTCATGAAATAGCCAGTTCTCTCGTTACCGCTGCGTTGTTTGACCGTGAAGTCAACTGTAGACGAGCAGCGTCTGCTGCCTTTCAAGAAAATGTCGGAAGGCAGGGTACCTTTCCACATGGTATTGACATCCTTACGTTGGCAGATTATTATGCAGTTGGAAACAGAGTAAATACTTACCTGACTGTTAGTGTGTCGATTGCTCAGTTCAAAGAGTACAAAAGAGCCCTAATAAACAATTTGGCTGATGTCAGGTTACAGCACTGGGACGGAAATATTCGTGAGCTGGCATCCCAAGCTCTGCATAACCTTACTCCTACAGATCCAGAGTATTTAGCCAAAGCAGtttttccTAAGATGCTATCACAAACGAACAGCATTGATCTGAATACTCGGCATGGAAACATTCTGGGATGTGCGGAGGTCGTTCATGCTTTGTATCTCTGGGCTCGACAGAATGAAAGATCGTTGACTGATGTCCTAGACAAGAATTGTTTTGAAGTTTTGAAGGACATTGTACCTCAGctaaCAGCAGCCAAGCGTTTCAGGGGCCTTGGAGGCGAGTATATGCGTCAAGCAGTTTGTCACCTGATTGAGAAGGTATCGATATCTGAGCTACCTTGGCATGGCGACCAGATAATTGACTTATTTCAATCTACCATTGATGATAACTTATCTCATACGGAGCCGGAAATACAGGAAGGTGCTGTGAGAGCCCTCAGTGCACTATGCCAGCAGTATTATGTTAAAGCAGACGGAACAGCTATCGATGGAATACAAGATAAAATCACCACTCATTACATAGGACAGCTGAAAAGCTCCTCGGAGTTTTCAAGAGTTGGGTTTTCTCAAGCTTTAGGATCTCTGCCGAAATTTTTGCTGTCATCAAGGTTAAAGCTGGTGTTTCCAGGTTTAATCACAGCGTCACAGTTAGCGAATGACCCCGGAAAATTCGCTGAATCGAGAAGGGATGCCCTTAAAGCTATTGCCAGAATCGCGTGTACCGTGGGGCTGAGTAGGACTGATGACGAGGATTACGTTGTAACCGAGACCAGTCTTCGTGCGCTTTACGATGCTTTCATCGCCGCCATGAGTGATTACACAATTGACAGCAGAGGTGACGTCGGAGCCTGGGTGCGTGAAGCCAGTATGACGGGATTAGAAACTTTGACGCGTTTTGTTGTGGAAAATGATCCTTCGCTACTGACACCGGAGATCTGTCAATGTGTGATGTACTGTCTGGCGCAACAAGCGTCTGAGAAAATTGATCGCACGAGAGCGCATGCTGGCGAAATATTCCTAAGACTTCTATATATGGACAGTCCTCCGTTGCCTCACATACCTCACCGCGAGGAACTTCTCGAAATTTACCCAAGAAATCAGTGTTTAGAGATGAACTGGAGTGCTCCCGCAGAATGCTTTCCTCGAATCACAAGGCTCCTGGGTTTGTCATCGTACAGAGGTCCTGTTCTTCTTGGTTTAACTGTCAGCGTTGGCGGTTTGACAGAGTCACTGGTTCGACATTCCTATGCTTCACTGCTTAGTTTCTTGAAAAGCATAAACAACAGTGAGGAGGAACTGAACGCATTTGCCGAGACGCTTTTGGAGATTTACCGAAAGCATCAAAAGAATGACAGAATTATTGTTCCTTTGTTCAAGATGCTTGATATGCTGTTTTCCAACGGGTGCTTTGAGATGTTCGCACAGGATGAAAACCATCCATTCCCGCAGACTGTGTTAGACCTCACAAAGAAAGAGGTCTTCAAACTTGGCGATGCCAGAAAGCTGATCACGAGTGTTAACGTGTTTTGTGGATTATTGCAGTTTCCGGGAGTGACACGGAAGAAATCTTTCCAGCAACTTTTGATTTTTCTCTGTCACAAATACCCGCAGGTTCGAAAAACTACCGCTGATCAACTGTATTCGGCTGCGTTAACTTATGATGACATCATCCCAGCAGAAAGCCTCGATGACGTATTAGCAATACTGAGCGAAACATCCTGGGATGCAAATATTGAAGAACTTCGCGCCACAAGAAACAACCTTTGCGATATCTTAGGTATCCCTCACCCGGTGATAAAGtCCTCCACAACGAAAACTGTTATCAATGAAAAGAAAGACGAATTGGAAAGCTACAAAGATCTTGTGAGTCGTCATGGATACTAG

Transcript

FUN_004677-T1

aaataaaaatggcggCGAAAGAGGAAGAGGCCTTGACATATAGCCTTGATCATTTTGCTGAATTACAAGAAGTAACAGCGTTGATCGAGTCCATAGGATCTATATGCCATGATGACATCTTACTTGAGGCTGCAGAGGAACGCTTAATCGTTATTTTGAACAAATACCAAGAGCAACCACATTTACTAGATCCACATCTAGAATACCTAGTGCAGAAACTACAGTGTATTGTTCAAAATTCATCAAATCTTGCCAAAGTGATTCGCCAAGCCTTCAAATATCTATACCTCATTACCAAGGTTAGGGGACCAAAGTATGTAGTACGACTGTTTGCTCATGAAGTTGCCGATGTTGAACCAGTTCTAGGAATGCTCTCTCAGCAGAATCCCCAGGATCATGAGACTTGGGAGGCCAGATATGTGCTGCTGTTGTGGCTCTCAATTGTCTGCATGATACCCTTTGACATGGCTCGCTTTGATGGGCTCAAAGACGTTGCTGCTGGAGCAGTGGAAAGGCGCAGACCAGTTGTGGAAAGAATTCTTGAAACAGCTAAGGTGTATTTATCAGTTCCTGACAAGTCAAGAGATGCCGCAGCATTAGTTATTTCAAAGTTTGTAACAAGACCAGATGTCAAGAAAGAGAAACTGTCCGAATTCCTGGATTGGTGTTTGATTAGGATGGATAAGGCTGATGGTGAGACAATGAATGGCATGTTATTACTCACTGGGATCTTAACAACACTGGCCCTGCTCTTCAAGCATGGGAAAAGGGAAGACCTGATACCTTTTGCTCCCATAGTACTGAAGCAAACTGGAGCTTGTCAGATATCAAGCACAAACAACACCCTCCTGAGGAAGTTAAATATTAAACTTGTACAGCGTCTTGGTTTGACCTTTCTGAAGCCAAGAGTGGCAGCCTGGAGATATCAAAGAGGTAGTCGTTCCTTGGCATACAACTTGGCAAATCCGTTTTCTCAAGACCAGAGTCAAAGGCAGCAAAATACAGCAAATTCTAGCATGGAGAATGAAGAAGAATATGATGTCCCTGAAGAGCTAGAAGAAGTCATCGAGAAGCTTCTCGCTGGCCTCAAAGATAAGGATACAGTGGTTAGATGGTCGGCTGCTAAAGGaGTTGGTAGAATAACCGGCAGGCTTCCTCAAGAGTTAGCTGATCAGATCGTGGAAAACGTTTTAGAGTTGTTCAGTTTCAGAGAATCCGATTCTGGTTGGCATGGAGgaTGCTTAGCTCTGGCCGAGCTCGGCCGAAGAGGTCTTCTCCTACCAGACAGACTTCCTGAAGTTGTACCCCCTGTGCTGAAAGCTCTGTCTTATGATGAGATAAGAGGATCATACAGTGTTGGTAGCCATGTTAGAGATGGTGCTTGTTATGTTTGTTGGTCATTTGCCAGGGCTTATGATCCAAAGGAGATCCAACCACATGTTCATGAAATAGCCAGTTCTCTCGTTACCGCTGCGTTGTTTGACCGTGAAGTCAACTGTAGACGAGCAGCGTCTGCTGCCTTTCAAGAAAATGTCGGAAGGCAGGGTACCTTTCCACATGGTATTGACATCCTTACGTTGGCAGATTATTATGCAGTTGGAAACAGAGTAAATACTTACCTGACTGTTAGTGTGTCGATTGCTCAGTTCAAAGAGTACAAAAGAGCCCTAATAAACAATTTGGCTGATGTCAGGTTACAGCACTGGGACGGAAATATTCGTGAGCTGGCATCCCAAGCTCTGCATAACCTTACTCCTACAGATCCAGAGTATTTAGCCAAAGCAGtttttccTAAGATGCTATCACAAACGAACAGCATTGATCTGAATACTCGGCATGGAAACATTCTGGGATGTGCGGAGGTCGTTCATGCTTTGTATCTCTGGGCTCGACAGAATGAAAGATCGTTGACTGATGTCCTAGACAAGAATTGTTTTGAAGTTTTGAAGGACATTGTACCTCAGctaaCAGCAGCCAAGCGTTTCAGGGGCCTTGGAGGCGAGTATATGCGTCAAGCAGTTTGTCACCTGATTGAGAAGGTATCGATATCTGAGCTACCTTGGCATGGCGACCAGATAATTGACTTATTTCAATCTACCATTGATGATAACTTATCTCATACGGAGCCGGAAATACAGGAAGGTGCTGTGAGAGCCCTCAGTGCACTATGCCAGCAGTATTATGTTAAAGCAGACGGAACAGCTATCGATGGAATACAAGATAAAATCACCACTCATTACATAGGACAGCTGAAAAGCTCCTCGGAGTTTTCAAGAGTTGGGTTTTCTCAAGCTTTAGGATCTCTGCCGAAATTTTTGCTGTCATCAAGGTTAAAGCTGGTGTTTCCAGGTTTAATCACAGCGTCACAGTTAGCGAATGACCCCGGAAAATTCGCTGAATCGAGAAGGGATGCCCTTAAAGCTATTGCCAGAATCGCGTGTACCGTGGGGCTGAGTAGGACTGATGACGAGGATTACGTTGTAACCGAGACCAGTCTTCGTGCGCTTTACGATGCTTTCATCGCCGCCATGAGTGATTACACAATTGACAGCAGAGGTGACGTCGGAGCCTGGGTGCGTGAAGCCAGTATGACGGGATTAGAAACTTTGACGCGTTTTGTTGTGGAAAATGATCCTTCGCTACTGACACCGGAGATCTGTCAATGTGTGATGTACTGTCTGGCGCAACAAGCGTCTGAGAAAATTGATCGCACGAGAGCGCATGCTGGCGAAATATTCCTAAGACTTCTATATATGGACAGTCCTCCGTTGCCTCACATACCTCACCGCGAGGAACTTCTCGAAATTTACCCAAGAAATCAGTGTTTAGAGATGAACTGGAGTGCTCCCGCAGAATGCTTTCCTCGAATCACAAGGCTCCTGGGTTTGTCATCGTACAGAGGTCCTGTTCTTCTTGGTTTAACTGTCAGCGTTGGCGGTTTGACAGAGTCACTGGTTCGACATTCCTATGCTTCACTGCTTAGTTTCTTGAAAAGCATAAACAACAGTGAGGAGGAACTGAACGCATTTGCCGAGACGCTTTTGGAGATTTACCGAAAGCATCAAAAGAATGACAGAATTATTGTTCCTTTGTTCAAGATGCTTGATATGCTGTTTTCCAACGGGTGCTTTGAGATGTTCGCACAGGATGAAAACCATCCATTCCCGCAGACTGTGTTAGACCTCACAAAGAAAGAGGTCTTCAAACTTGGCGATGCCAGAAAGCTGATCACGAGTGTTAACGTGTTTTGTGGATTATTGCAGTTTCCGGGAGTGACACGGAAGAAATCTTTCCAGCAACTTTTGATTTTTCTCTGTCACAAATACCCGCAGGTTCGAAAAACTACCGCTGATCAACTGTATTCGGCTGCGTTAACTTATGATGACATCATCCCAGCAGAAAGCCTCGATGACGTATTAGCAATACTGAGCGAAACATCCTGGGATGCAAATATTGAAGAACTTCGCGCCACAAGAAACAACCTTTGCGATATCTTAGGTATCCCTCACCCGGTGATAAAGtCCTCCACAACGAAAACTGTTATCAATGAAAAGAAAGACGAATTGGAAAGCTACAAAGATCTTGTGAGTCGTCATGGATACTAGAACATCTTTGTTGCTGGCAAACAGTAAAACTGGACTGGAGAGAGGATTTTTCCGTCAAAAGTTGGATTCTGACACCGTCTGAAGCTGCTCGTTATTTCCACATACCAAGCTATCTCCACACAAAAACACTTAATAAAAATAGCCAACAGAGCACGCAGTGAAAAGATAAAAGAGGAAGATTGTGGCTGATATCTGCGATAGTATTTTGATATCAGCCGGGtgctgaacttttttttttttttttttgactgaGGACGTTACAAGAAATGTGTAAATACAAGGAAATTTCAAAGACGGCAGGCAGAgaagaaatatttttaatttatttcacaaACGTGATCCTTTTTGTACGTAAATATTGAGGGCTTGATGTTACAAAGGATTTTATTGTACGATATTTAATACATTTTCTTTAGTCTTTTATTTTCCATGGCTACGAGAGGCTTTTCTCGCACGTTCGACGACGCGCGAACTTAGTGACGTGTGTTGTCTTATCGATCAGCGCTCTTCGGCGCGCGTTAATCGTTTTCCTTCGGCCCACGACAGCTCCACAGAAGCACAGGAGATCAAGAGAAATCTCTGGTTTAACATGCACTTCTTTTCTCACTGTTAAACAACCTTCAATAAAGTATCGTCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12612 all species →	TFCD_C	Tubulin folding cofactor D C terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR022577 all species →	Domain	Tubulin-specific chaperone D, C-terminal	Interproscan
IPR033162 all species →	Family	Tubulin-folding cofactor D	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12658 all species →	BETA-TUBULIN COFACTOR D	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0007021 all species →	Biological Process	tubulin complex assembly	Interproscan
GO:0007023 all species →	Biological Process	post-chaperonin tubulin folding pathway	Interproscan
GO:0016328 all species →	Cellular Component	lateral plasma membrane	Interproscan
GO:0034333 all species →	Biological Process	adherens junction assembly	Interproscan
GO:0048487 all species →	Molecular Function	beta-tubulin binding	Interproscan
GO:0070830 all species →	Biological Process	bicellular tight junction assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21767	TBCD; tubulin-specific chaperone D	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_004677-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

74TPM > 0

7Conditions

1,068.7Max TPM

284.9Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	18	353.10	833.90
holobiont · low.pH Control.temp	20	16	235.03	664.26
holobiont · control.pH_high.temp	20	17	319.84	1,068.68
holobiont · control.pH Control.temp	19	17	310.21	761.19
Whole organism	4	4	30.44	39.36
unannotated	1	1	22.78	22.78
live coral tissue/skeleton	1	1	20.79	20.79

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	833.90
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	820.87
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	662.74
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	656.30
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	547.81
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	524.42
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	346.71
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	343.26
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	338.44
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	283.84
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	275.23
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	274.33
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	261.46
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	259.06
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	244.33
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	138.83
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	126.98
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	123.52
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	664.26
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	620.09
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	604.36
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	388.42
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	375.19
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	350.84
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	335.56
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	259.60
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	231.16
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	177.56
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	128.05
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	118.05
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	117.80
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	117.59
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	113.76
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	98.36
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	1,068.68
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	665.90
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	642.66
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	561.82
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	546.37
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	512.48
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	397.98
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	302.05
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	277.49
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	255.25
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	218.68
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	209.17
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	190.91
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	163.83
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	138.90
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	123.67
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	120.93
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	761.19
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	712.84
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	614.94
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	559.66
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	535.54
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	521.46
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	443.13
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	363.00
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	323.94
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	246.52
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	203.60
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	144.05
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	143.89
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	131.78
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	89.10
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	59.93
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	39.32
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	39.36
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	30.30
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	29.79
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	22.30
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	22.78
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	20.79

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.