Detailed information of FUN_004720-T1 in Acropora pulchra

Genomic Location: ntLink_8:26228989...26229525
NR annotation: XP_029197680.2, partner of Y14 and mago-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B1WB17Partner of Y14 and mago OS=Xenopus tropicalis OX=8364 GN=pym1 PE=2 SV=1
Q640E9Partner of Y14 and mago OS=Xenopus laevis OX=8355 GN=pym1 PE=2 SV=1
Q8CHP5Partner of Y14 and mago OS=Mus musculus OX=10090 GN=Pym1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009080 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09282
all species →		Mago-bindMago bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015362
all species →		DomainWIBG, Mago-bindingInterproscan
IPR039333
all species →		FamilyPartner of Y14 and magoInterproscan
IPR036348
all species →		Homologous_superfamilyWIBG, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22959
all species →		PYM PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0035145
all species →		Cellular Componentexon-exon junction complexInterproscan
GO:1903259
all species →		Biological Processexon-exon junction complex disassemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14294WIBG, PYM; partner of Y14 and mago-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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