Gene detail

Detailed information of FUN_004882-T1 in Acropora pulchra

Genomic Location: ntLink_8:28331981...28336390
NR annotation: XP_029193189.1, probable 39S ribosomal protein L24, mitochondrial [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DH02	Large ribosomal subunit protein uL24m OS=Danio rerio OX=7955 GN=mrpl24 PE=2 SV=1
Q6GPM4	Large ribosomal subunit protein uL24m OS=Xenopus laevis OX=8355 GN=mrpl24 PE=2 SV=1
Q3SYS0	Large ribosomal subunit protein uL24m OS=Bos taurus OX=9913 GN=MRPL24 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006770 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00467 all species →	KOW	KOW motif	Family	Interproscan
PF17136 all species →	ribosomal_L24	Ribosomal proteins 50S L24/mitochondrial 39S L24	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003256 all species →	Family	Large ribosomal subunit protein uL24	Interproscan
IPR005824 all species →	Domain	KOW	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR041988 all species →	Domain	Large ribosomal subunit protein uL24, KOW domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12903 all species →	MITOCHONDRIAL RIBOSOMAL PROTEIN L24	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02895	RP-L24, MRPL24, rplX; large subunit ribosomal protein L24	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.