Detailed information of FUN_004905-T1 in Acropora pulchra

Genomic Location: ntLink_8:28551510...28596304
NR annotation: XP_029193196.2, LOW QUALITY PROTEIN: fibrillin-2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61555Fibrillin-2 OS=Mus musculus OX=10090 GN=Fbn2 PE=1 SV=2
P35556Fibrillin-2 OS=Homo sapiens OX=9606 GN=FBN2 PE=1 SV=3
Q75N90Fibrillin-3 OS=Homo sapiens OX=9606 GN=FBN3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003150 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00683
all species →		TBTB domainFamilyInterproscan
PF12662
all species →		cEGFComplement Clr-like EGF-likeDomainInterproscan
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR017878
all species →		DomainTB domainInterproscan
IPR036773
all species →		Homologous_superfamilyTGF-beta binding (TB) domain superfamilyInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR026823
all species →		DomainComplement Clr-like EGF domainInterproscan
IPR052080
all species →		Familyvon Willebrand factor C/EGF & FibrillinInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47333
all species →		VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23342FBN2_3; fibrillin 2/3-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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