Detailed information of FUN_004918-T1 in Acropora pulchra

Genomic Location: ntLink_8:28717974...28725096
NR annotation: XP_029193239.2, OTU domain-containing protein 7B-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B2RUR8OTU domain-containing protein 7B OS=Mus musculus OX=10090 GN=Otud7b PE=1 SV=1
Q6GQQ9OTU domain-containing protein 7B OS=Homo sapiens OX=9606 GN=OTUD7B PE=1 SV=1
Q8R554OTU domain-containing protein 7A OS=Mus musculus OX=10090 GN=Otud7a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008410 (this species only)
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species
Ubiquitin familyUBD|ZnF|ZnF_A20 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14555
all species →		UBA_4UBA-like domainDomainInterproscan
PF01754
all species →		zf-A20A20-like zinc fingerFamilyInterproscan
PF02338
all species →		OTUOTU-like cysteine proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR002653
all species →		DomainZinc finger, A20-typeInterproscan
IPR003323
all species →		DomainOTU domainInterproscan

 PANTHER
No PANTHER signature was detected for FUN_004918-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11860OTUD7A_B; OTU domain-containing protein 7EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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