Detailed information of FUN_004928-T1 in Acropora pulchra

Genomic Location: ntLink_8:28893319...28896056
NR annotation: XP_029193167.2, LOW QUALITY PROTEIN: homeobox protein orthopedia-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6SR69Homeobox protein orthopedia OS=Heliocidaris erythrogramma OX=7634 GN=Otp PE=2 SV=1
Q6SR68Homeobox protein orthopedia OS=Heliocidaris tuberculata OX=7635 GN=Otp PE=2 SV=1
Q6SZ65Homeobox protein orthopedia OS=Lytechinus variegatus OX=7654 GN=Otp PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007197 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03826
all species →		OAROAR motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051895
all species →		FamilyOrthopedia HomeoboxInterproscan
IPR003654
all species →		DomainOAR domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46770
all species →		HOMEOBOX PROTEIN ORTHOPEDIAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0030182
all species →		Biological Processneuron differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_004928-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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