Gene detail

Detailed information of FUN_005008-T1 in Dendrogyra cylindrus

Genomic Location: contig_5:2295720...2327384
NR annotation: XP_020615885.1, uncharacterized protein LOC110053914 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_005008-T1

ATGGAGGTGTTCACACACAatctttttcttaaaattgtgCTATTTATTCTGCTCCTGTCGTttggtaaaggtaaagGCCAGTTAGATGCATGTACTCCAAACCCTTGTGAAAATGGTGGCACGTGCGTCCCAAATCAGGTATCAAGGACCACAACAAGACGTACTGCAAGAAATGTGCTGTTTGACTACTCGTGTGAATGCCCTGGCGAGTTCACTGGTCAGAACTGCTCTTCACTTACCTTTGTAGCAAGCATTGGCATCTCGGATATTACAACCCGTGATCTTCTGCCATTTGTAACAGCCGTCTCGCCATCTGATTTGACTAATTTCAATGCATCGCGTCTCGGTTCCACCATATCGCTTTCCCCTGTTGCTCAAGTTTCCAATCCCCCAAACACTTTCAAGTGGACAGTGAATGGGACTACTCTAAACCCGACGCAGAATAACCGTTTCACGATATCAAGCTCAAACGGAAGATTGACGATATCTGGTGGGCAGCTGGCTGATGAAGGAGAATATCAGTTCTTCATATCGAACGAATTTGGAGCGATGTTTAGTAACAAAGTGGGGCTGAAGTTTTCAGTCACTGGAAACTTTATTTCACCTAATACACCCATCAACATAAGCTTGACCGAGGGTGAACCTTATCTTCTTCAGTGCCCGCCGCGCTCATACAGTTACCGTGTGAGCTACGATTGGGAAGCCGTTGTTGGATCTCGCCAGCAATCAATAGCCAATAACCCGAACTATGCCCCGCGTATACTCATGGAGCCAAACGGGGATTTACTTTTCTCGTACATCAACAGTAGCGATTTTTTCTTGAACCCTTTTCAATGTAAAACGACTGATCTTTTTGGGAATTCTGTGATTGGACCGAACGTGTTTTTAAACATTGCAAGTTCAGGTTCACAGGGTAAATCATCGGTTACATTCAAGACAAAACCCATCGGTTTGTACACATTGGCCACCGGGGATCAGTTCTATCTCAATTGTACCGCAAAAGGAAGGCCTATACCAAGGATTCTTTGGTATAGGAACCAAGTACTGATAGCTGATTCAGGAGATCACTTTCAACTTAAAGTTTACAATAGAACCCTCCGATTGGGCTCGCTAAGCTCGGCGTCACACGATGGAACCTACAAGTGCGTGGCAGACAGTGGAAATCTCAGAGTGGAGAAAAGTTTTTCTATCAAAGTCATAGACAAAGTAACACCGCTTTACAGTAAGGAACATAAGGGCTTTGAGAATATTGAGATCAAATCTGCGAAGCATGGTGAGAGCGTGACACTCCCCTGTAACACAACTGGAGGTGAAATACTCAGTCGGACATGGTATTATAATGGAGCTGAACTTCAGTACAGTTCAAAGTTTACCAACAGATGGTCTGTTAAGGCTTCAACCGGAGTACTACAGCTTAGCAACCTGCAGTTAAAGGACTTTGGCTTCTTCCAGTGCGTCGTTAAGAATAAAGTCAGCGAAGATTACGTGGTGTCGCTTTTAGTCGTCACAGgaGCGCCTCTAGCCCCCTACGGGGTGAGCACGACCAACTGTGCGAACTATACAACAAACCTTACGTGGAGTGTTGTCCTTCCTCCTGATATTCTTCCTCCACTTGGTTTCATCATCGAGGTGGCGTATAGGTACAGTTCAAGTAATTTGCCAATCTCCTCTTTTTCTAAGCTGGCCGATGTTTCAAGCGGTTCCGCTCGCTCGTACGTGGTGAAAAATCTGCAGCCTCacaacgttttctttttccGCGTCCGTGCTAAAAATCAAGTTGGTGTTGGATTTCCCGGGTATGTGCAGACTTCGGAGCAGTTTTCGTGTGTCACTAATAGCAGAAaACCTTCGGTTTATCCTGAGAACTTAATTGGTTCTGCTCTTAATTTTGACGGACTGTTGAACATCAGTTGGAAGGCTTTTGACTCAATCGACTGGGGCGGTGGCAACTGTGTCTATAAATTGTTTTATCGTCTAAACGTCACAAACGCAACCTGGACCAACATAACCGTATCTGGTGGATGCGATCGATCTAGCTGGACTTTATCAAGACTGCTCCCAAACACTCTTTATGAGATTGCCATTCGAGCTGAGAACAACGAGGGGCCTGGACCGACAAGTCCAagtatttttgctttgtctGGACAGAGCCCCCCACCGGAGCCTCCCGCTGACCTGACTGTTTTGCGCGTGGACTCAAGTACTGTGGAGCTGGAATGGGCTTCTTATCCTGTTACGCCCCCTAAGACAGTGGACGGTTATTGGATCTACGCCTGGAATGGTCCTCGTAGCGATCAACGCGTGTTCGAGTTCGAGGAGATTCAGCGGTTCGTTTTATTGATACCGCCTGATGCCATTCGCGTCCAGGTCGCTGTGAGAGGTGTAACCCGACGCGTGGTGGCAGGGCTGGAGCCTTGGACCGAGTATAATATTGCAGTGCAAGGTTATAACAGTGGGGGACTGGGACCTTTTAGTGTTGAGGACCTATCTGTAACTACTCTGGATTCGAAGGATTCCTATTACATTTTGTCATTGAGAATCACAAGTGAAGCGTTCACCGAAGACCTTAAAGACGAATCTTCGAGTaaatttaaaaccttgaaaGCAAATGTAACACGAGAGGTATCAAAACTGTACGAGAAGCAACCATGGTTTAAAAGTGCTGCGGTGCTTTCTTTCAGCCCTGGAAGTGTTCAAGCAGAAGTTCAGCTGGAAGCAGCGAGTCCCAATATGAGTGCTGTTTTCCAAGTGGTATCTTCGATGGATAATCTGGGTAATTTCTCCGTGGATCGAAATCGAACAGAAATACGAAGCGAAAGAGGAATACAGAGTGTGACGTTGAAGGCATCCCATTTGCTGGTGAACGTGGGCGGCAAATTTGACATTAACTGTACTGTGATTGGTGGGCCGGACGACCTGAACATCATGTGGTTTAAAGCTGGAAACGTGATTGGTCTAACCCACCGCACAAAAGTCGAGACTAAACTACGTCATTCCCGCTTGACCGTTAGAGACGTAATGGCGGAAGACGAGGGAGACTATGTCTGTCAAGCAATCAAAGGAAATCAAAATTATATCGCGAGTGTATTTATTGGAGTAGTCCCTGTACTTGAAATTACACCTCGAACTGTCACCAAGCGCGCGGGTGACAAAGCAACGTTTACCTGTGGTGTGGTCAGCGGCTTCAGGAAAGGAGCAAGCGTAGTTATAATAGAAGTGACGAACAAAGACAATGAAGTACCTTATCAGGAAGTGAACTTTACTGCAACAAATCTGCAAATCCCTGAGGGAGGGGAGAGTCATGTGAGGAAATTTGTCTGTGAGATGTCGGTGCAACAAAAAGTGTTGTCAAGGAGCGAGGTGGCAGAGTTGATCATTATCAAACCAGaGGCTCCAAAGTGTCCGGAAGAGCTGCTAGATGGTGTACTCTGGTCAGCGACGGCCTCGGGACGAACGGATATAAAACCGTGTCCGAATGGAGCCAGAGGAACCGCTTCACGTATTTGTTCTGAGGACGTAACGTGGAAAGACTCCAACTTTGTAGGCTGTAGCTCAGCTGAATTTCTCAGGTTAGGTGATGAGATCGAAGCAATTACGGAAGATTTTCAGTCAAACACTACCGCCCAACAAGTCCTATCACAACTTGTGAACGTCACTCGGCCAGTGCCGGAAAACGATACCAAAAGGCCACCAGAGATCTTCGGAGGGGACTTAGTTATAGCTGTGGAGATACTTGTCACACTGGCCGACTACAATGCTAAACAAGGAAATGTGAGTACAGAAGAAGATACGGGGAATTTCGCACAAGTGGCCAGTTACTTGTTGGAAACAACGAACCGTATAACTTGGCAAGAACTCGAAAGATTGAATCAGGGTCAAGGTCGAAGCTTGGTCAAGGCAATGGATGATTATGGTCTGGGAGCCGCTGCCACATTCACTGGGCCGACAGACTCAAGAGTTGTTCAAACAAAGAATCTAGTGATGAGGATTGATCGAGCAAATAAAAACAGTCCGTTGAGAGTTAAAGGCTTAACTGTAACGTACAATCAAAGTTCCATCCAGCTCCCTCCTGAAGCTTTCAGATCATCTCGTGACTCTCGCGTCATAACCTTGGTTTATCTCACGTTGAACGATGTTTTACCACTCggcaaagaaagaaaagatgatgacgatgaagatGAGGATGCGCTATCCGCCAATACCACTATCGTCTCTTCCACTATCGATCCCAGGCCCCCATCAGTTTTGAACAAGCCAGTGAAGATCGTTCTTCAGAACAGAAGGGTGAATGTTCCAACTGGAGTCATCCCACAAGGAAAGTGCGTTTTCTGGCGGCCCGGAGGATCCGCGATTTGGCAGACCAGCGGCTGCAGACTTGTACCTAGCGAGTCTGACATCGACATAACAACATGCGAATGTGATCACCTGACCATCTTTGCCTCACTCATGGATCCCGTCGGGGCACCTGTTACTGAAGCTCACACAAGAGCTTTGAAAATCATTTCAATAGTCGGCTGTTCCATCTCTCTCCTCGCCGTGATCATCACTATAGCTGTTACTCTGTTCTTCTGGAGAGCGGTGAAAAGCCCAAGAGCTAAAGTTCTGCTGAACCTGTGTGCTGCTGTGGCCGTATCGTGTATTCTTATCATATTTGAAGGATCAGCGAGAGATAACGAGGTGGGCTGTACTATACTAGCGGCCTTACTGCACTACTTCTTGTTGGCCCTGTTCTGTTGGATGCTGTGCGAGGGCGTCTTACTCTACATCTTACTCGTGAAAGTGTTCGGAGGTGGAGCTGAGGACAAAGTCAAGTACTTCTACATATTTGGATGGGgTTTCCCTGTGATCATAGTCGCCATTTCGTTAGGTGCTACTCAAGCCGATGGCTATGGTTCGCCAGAAGCTTGCTGGCTTGATGTCCCAAGTGGACTCATCTGGGCATTCATTGCCCCAGCAATAGTCATTATCTTGGTAAATATTGTGGTGTTTATTCTGGTGATTCGCCAAATGATGGGAACAAGACACGTACAAAACAAGACGCAAATTGACAAAGTGAAAGCTGGAGTCAAGGCCTCCGCGGTCATTCTTCCCTTGCTTGGAATCACGTGGTTGTTTGGACTTCTGAGCTTCAGCTCATCCACGGTCGCCTTCAAGTACATATTCGCCATTGTTAATTCACTACAGGGACTGATGATATTCATCTTTCATTGCTTGTTGAACAAGCAGATAAAGGACGCCATCAAACGAAGACAAGAAAAAGGCAGTACAGCTGTTGCCTCCACGACTCCAAAAACCAAACCCTCTCCAATTCAGAACGTTAAGCACGGTGTTAATGTGTCAGCTCCAGCCAACAAGAAGCGATCGAACCGTGCTCAAAACGATTATGAAATGGTGGACAGCATTGCGAGTGAAAACAGTATGTCAACGATGCCGAGTTCACAGGACAACAAAGACGCCATAATTAATATCCCAGAAGATCAAAATGTTAATGAGCAGTTACCGACGACGAAAGTGCTCCCGCAAGTGGAGCCAAAAGAAGAAAAGACTTTGCCGCATTTGGAAAACGGTAACCAAAGTCTGTGGGTAGACGATAGTGATGTCATACCTAACCACGGGGACTCCGAACAAGAGAGCGTAGACGAAAGAACGTCTAGTAACTCATTCATACCACACGAAGCACAAGGAAATGGGCGAGAACGATCCTCGGAGGGATCCGAGAGAGACAATGAGGTCGAACTTGATCGTAAGGTCTCAATAGAAGGGCTCATAAATCATATATACGAGAAACCACCCGATGAATATGTCCCTTCTTTTGAAGAATTCCAGAGAAGGGATGAAGCTCATCTTCGTCTTGAAGACAAGGACGAGGACACGGAAGTGGAGAGTGCAGACGAAAGAACCCCTGAGAACTCCCCAGAGGGGTCGAGGAGAAGTGAAGAGCTCGTACATAACAAGAAGGTGTCAATAGACGGGGTCGCAAATCAACTATACGAGAACACACCAGATGAATTTGACCATTCTTTTGTGAAAATCCGAAAAAGGGATAAAGAACTACTTCATATTGAAGAACGGCGTTCATCAtcatcttcctcttcctctgatTCGGAAATTGAATCTGTTGAACTATCCAAGGAATTTAATCCTGTAATCGACCAGGAAGATGTTAGCTGTGTTGTTGAGGATGAGCCCCTCGAAGGAGCTTTACCATCAAACTCAGATGACCCCACAACAGCTCGAACAACTGCAGAGACAGTAGAGCCAAAGAAGTTTGATGACTCTGTCAAAAATGATGAAGACTTCGAGAAAATCATGACAGAGAGGCGAACAAAGGTTGATACAATCCAAAGAGTGGCTGATGCATTTAAGCCACACTCGTTATCCGTTCAAACCACCTCTTCACACAGTTTGTGGGAACAAGTGCGCAAGAAGATACACAGAGGGAGCTACAAAATGACCAAAGCTGGTGGTGCTCCAGACGAATCTGAGACGAGAAACGATGTCTCTGACAATATCGAGGAAGTCGAATTAATGTAA

Transcript

FUN_005008-T1

Protein

FUN_005008-T1

MEVFTHNLFLKIVLFILLLSFGKGKGQLDACTPNPCENGGTCVPNQVSRTTTRRTARNVLFDYSCECPGEFTGQNCSSLTFVASIGISDITTRDLLPFVTAVSPSDLTNFNASRLGSTISLSPVAQVSNPPNTFKWTVNGTTLNPTQNNRFTISSSNGRLTISGGQLADEGEYQFFISNEFGAMFSNKVGLKFSVTGNFISPNTPINISLTEGEPYLLQCPPRSYSYRVSYDWEAVVGSRQQSIANNPNYAPRILMEPNGDLLFSYINSSDFFLNPFQCKTTDLFGNSVIGPNVFLNIASSGSQGKSSVTFKTKPIGLYTLATGDQFYLNCTAKGRPIPRILWYRNQVLIADSGDHFQLKVYNRTLRLGSLSSASHDGTYKCVADSGNLRVEKSFSIKVIDKVTPLYSKEHKGFENIEIKSAKHGESVTLPCNTTGGEILSRTWYYNGAELQYSSKFTNRWSVKASTGVLQLSNLQLKDFGFFQCVVKNKVSEDYVVSLLVVTGAPLAPYGVSTTNCANYTTNLTWSVVLPPDILPPLGFIIEVAYRYSSSNLPISSFSKLADVSSGSARSYVVKNLQPHNVFFFRVRAKNQVGVGFPGYVQTSEQFSCVTNSRKPSVYPENLIGSALNFDGLLNISWKAFDSIDWGGGNCVYKLFYRLNVTNATWTNITVSGGCDRSSWTLSRLLPNTLYEIAIRAENNEGPGPTSPSIFALSGQSPPPEPPADLTVLRVDSSTVELEWASYPVTPPKTVDGYWIYAWNGPRSDQRVFEFEEIQRFVLLIPPDAIRVQVAVRGVTRRVVAGLEPWTEYNIAVQGYNSGGLGPFSVEDLSVTTLDSKDSYYILSLRITSEAFTEDLKDESSSKFKTLKANVTREVSKLYEKQPWFKSAAVLSFSPGSVQAEVQLEAASPNMSAVFQVVSSMDNLGNFSVDRNRTEIRSERGIQSVTLKASHLLVNVGGKFDINCTVIGGPDDLNIMWFKAGNVIGLTHRTKVETKLRHSRLTVRDVMAEDEGDYVCQAIKGNQNYIASVFIGVVPVLEITPRTVTKRAGDKATFTCGVVSGFRKGASVVIIEVTNKDNEVPYQEVNFTATNLQIPEGGESHVRKFVCEMSVQQKVLSRSEVAELIIIKPEAPKCPEELLDGVLWSATASGRTDIKPCPNGARGTASRICSEDVTWKDSNFVGCSSAEFLRLGDEIEAITEDFQSNTTAQQVLSQLVNVTRPVPENDTKRPPEIFGGDLVIAVEILVTLADYNAKQGNVSTEEDTGNFAQVASYLLETTNRITWQELERLNQGQGRSLVKAMDDYGLGAAATFTGPTDSRVVQTKNLVMRIDRANKNSPLRVKGLTVTYNQSSIQLPPEAFRSSRDSRVITLVYLTLNDVLPLGKERKDDDDEDEDALSANTTIVSSTIDPRPPSVLNKPVKIVLQNRRVNVPTGVIPQGKCVFWRPGGSAIWQTSGCRLVPSESDIDITTCECDHLTIFASLMDPVGAPVTEAHTRALKIISIVGCSISLLAVIITIAVTLFFWRAVKSPRAKVLLNLCAAVAVSCILIIFEGSARDNEVGCTILAALLHYFLLALFCWMLCEGVLLYILLVKVFGGGAEDKVKYFYIFGWGFPVIIVAISLGATQADGYGSPEACWLDVPSGLIWAFIAPAIVIILVNIVVFILVIRQMMGTRHVQNKTQIDKVKAGVKASAVILPLLGITWLFGLLSFSSSTVAFKYIFAIVNSLQGLMIFIFHCLLNKQIKDAIKRRQEKGSTAVASTTPKTKPSPIQNVKHGVNVSAPANKKRSNRAQNDYEMVDSIASENSMSTMPSSQDNKDAIINIPEDQNVNEQLPTTKVLPQVEPKEEKTLPHLENGNQSLWVDDSDVIPNHGDSEQESVDERTSSNSFIPHEAQGNGRERSSEGSERDNEVELDRKVSIEGLINHIYEKPPDEYVPSFEEFQRRDEAHLRLEDKDEDTEVESADERTPENSPEGSRRSEELVHNKKVSIDGVANQLYENTPDEFDHSFVKIRKRDKELLHIEERRSSSSSSSSDSEIESVELSKEFNPVIDQEDVSCVVEDEPLEGALPSNSDDPTTARTTAETVEPKKFDDSVKNDEDFEKIMTERRTKVDTIQRVADAFKPHSLSVQTTSSHSLWEQVRKKIHRGSYKMTKAGGAPDESETRNDVSDNIEEVELM

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C0HL12	Adhesion G protein-coupled receptor B1 OS=Rattus norvegicus OX=10116 GN=Adgrb1 PE=1 SV=1
Q3UHD1	Adhesion G protein-coupled receptor B1 OS=Mus musculus OX=10090 GN=Adgrb1 PE=1 SV=1
Q80T32	Adhesion G-protein coupled receptor D1 OS=Mus musculus OX=10090 GN=Adgrd1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000438 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF16489 all species →	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF02793 all species →	HRM	Hormone receptor domain	Family	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan
PF01825 all species →	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR000203 all species →	Conserved_site	GPS motif	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR013106 all species →	Domain	Immunoglobulin V-set domain	Interproscan
IPR032471 all species →	Domain	GAIN domain, N-terminal	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR017983 all species →	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR008077 all species →	Family	GPCR, family 2, brain-specific angiogenesis inhibitor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016525 all species →	Biological Process	negative regulation of angiogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_005008-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.