Gene detail

Detailed information of FUN_005155-T1 in Acropora pulchra

Genomic Location: ntLink_8:31883704...31891702
NR annotation: XP_029209365.2, uncharacterized protein LOC114973110 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_005155-T1

ATGGAGGACAGAGACAGAGATATTTTGAAGGAGAACCGGATGTATTTAGCCAGAAATATAGGGAAAACACAGATTGTTAACGTTGTTAACGAGCTGTATTCTCGATACGTATTCACGTATGATGATTTGGAGTCGATTTTGAACGAACCAAGAACATCTTCCAAAGTGTTTGAGCTCTTAGATCGACTTGTTTGTTGTGGGCCGAAAGCTTTTAACGCGTTCCTGCAAGTTCTACAGTGCTGCGGCTGTCAATTTGTCGCAGCCACTATTCAACAGCAGTTAACAGGAACCCCTATTCAAGAGCAATTAACAGGCAACTTTTCTACTGAGGCTTATGAAAAACGAGGAACTTTTTGTATTGGTCTCCCAACACGGGCATCCAAATTCACTGGAAGAAATGAAGATTGTGAGGAAATAACCACAAAGTTGACTTTCAATGATGATGACAATCGCATTTGTTTAGTTGTGGCACCTCCAGGGTTTGGAAAGACAGAGACTGCTACAGCTGTTGGTTACATGATGAAAGACCAAGGAAACAACATACTGTACTTTTCTCTTAGAAATGTCAAGCTTATGACAACTGCAGCTAAGAACATGCTTGAGACAATTGGCATTCCAGTCGGAGGTGATCCTATCTGGCAAATTACACAACACCTGCAGTCACTTCTGAAGCAAACAGTTCTGATTCTAGACAATGCTGAAGATCTACAAAAGGGGGATGAATCCTTGTTTAGCCAATTCTTGGAAGCAATTAGCAAAAATGCAAGGAGCCTTAATACCCTTATAACCAGTAGAATCTGCCTCTCCAAACGGGGTGCTCATTTTGATTGTTTTGTTGTGCCACTGAAACCATTGACAGATGAACAGTCACTTGTCTTTCTGAAGATTTATGACGTTGAAGATCTGTGGGCAAAACGTTTTTCACCGTTTAATGTCTGTGGCGGTGTTCCGTTGCTGCTTAAAATCACAGCATCGTTTTTGACTCAGTCAGGGACTATTGATCCAGTCGAGCTTCACAGAAACCTGCAGAAATGCAAGGATAAATTTCTCATGGGAAAGCATCCTGATGTCCAAGATCTACAATGTCACTTAGAGGTATTTTATAGCTATCTGCCACCAGACATTAAGAAGGCCCTTTCACGTTTGGCTGCATTTCCCACTGTCTTCACCAAGAGAGAAGCCAAGATAGTTCTGTTTGAAGATGAAGACGAGCTAAATTTTCAGTTCATGCTTGACACAATTGAAAAACATTCACTTGTTCATGGAGATGATGTTGAGGGCTGTCAGCAGTACAGCTTACATCCACTTGTACAAGCTTTCTGTGTTACCTCAAGTGGGAACCAGAGTACTGAAGGTTACACAAGTGCAATTAGACTGTTTTCACAGCACTACCTCACACTCCTGCACCAAGCCAATGAAGATTTCATCTCCACAACTTGTAAAGATGCAATAAAACAATACCAGTTAAACAAGATTAACATTTGCCATGCTCTCATGGCAGCAGCCAATGATAAATGTTTAAATTATTATGGCCTTTGCATTGCCACAGAAACTGTAAATTTCCTGGCAAAATGCATGAATATGAATGAATTTTTATCTGTGTATGAGAAATTTCTAAAAGTTGCAAAAGATCGGGGAGAACAAGGGCTTTACAGTGAATGTCTAGCGGCTATTGGATTCAAACAAGTTTGTTTTTATGGTTACAAAGATGCACATGACACAGAGGCAATGGCAAACCTTGAAGAGGCACACAATCTGTTGAAATCCCTTGATATTAAGAATGAGTGTCGTGGTTATTGTGCGTGCAAACTTGGCCTTTGCACTTTGGCTGCTGCTGAGAAAGAGAAAGAGAGCTCTCTACTTGCAAAAGGAAAGAAAGAGAAAGGGATCTCTCTACTTGCACAAGGAATTGCTCTACGAAAAAGTTTAGCAAGAGCTGAAAATGCTGGCAAAACAGAGGAGATGCTTGTCGGGGGAGGATTTTCTGATCTTGCAATGGCTATGTTTGCGAGTGGTAAATATCTTGCAGCCATAAACATTTGGAAGAACATCTGCCTGGTCAAGTATCGCAGAATTCTTGGAACTCACCCATTCACTGCATCAGTGTTAGATTACCTGGGCAGTGCTTACCAGAAATATGATTGTCCTCAGGAAGCTGTAAAATGCAAGAGAGAGAGTCTTGAGATGAGACGCTTCTTGTTAGGAGAAGAGCACCTCGACACAGCAAGGGCTTATTATGGTCTAGGCTGTTCTCTAGGAATCTTGGGTTCCATTACAGAAGCAATAGAGAACCTAGAAAAAGCCAAAAAAATCCAAGTTCATTCACATGCCTCCCAACAGCACAGAGAAAGTACGCAATGTGAACTGCAATATTGGAGGCGCAGGCAACCAGATAAGTGTGAGAGTGTTACAATGGTGAAGGAACTGTAG

Transcript

FUN_005155-T1

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000323 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01695 all species →	IstB_IS21	IstB-like ATP binding protein	Domain	Interproscan
PF00619 all species →	CARD	Caspase recruitment domain	Domain	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001315 all species →	Domain	CARD domain	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002611 all species →	Domain	IstB-like ATP-binding domain	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691 all species →	REGULATOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_005155-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.