Detailed information of FUN_005389-T1 in Acropora pulchra

Genomic Location: ntLink_8:34805152...34814204
NR annotation: XP_029194847.2, disease resistance protein RPS2-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000307 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13401
all species →
AAA_22AAA domainDomainInterproscan
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF01335
all species →
DEDDeath effector domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR049945
all species →
DomainORC1/DEAH AAA+ ATPase domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR001875
all species →
DomainDeath effector domainInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47691
all species →
REGULATOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0042981
all species →
Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_005389-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP