Detailed information of FUN_005390-T2 in Acropora pulchra

Genomic Location: ntLink_8:34817878...34834823
NR annotation: XP_015760871.1, PREDICTED: uncharacterized protein LOC107340040 [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IVU3Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens OX=9606 GN=HERC6 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006713 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13540
all species →		RCC1_2Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051210
all species →		FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870
all species →		REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_005390-T2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_005390-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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