Gene detail

Detailed information of FUN_005552-T1 in Colpophyllia natans

Genomic Location: contig_6:9640229...9640919
NR annotation: XP_020611837.1, late histone H2B.L4-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P07795	Late histone H2B.2.2 OS=Psammechinus miliaris OX=7660 PE=3 SV=2
P35068	Histone H2B.1/H2B.2 OS=Tigriopus californicus OX=6832 PE=3 SV=2
P02289	Histone H2B, embryonic OS=Strongylocentrotus purpuratus OX=7668 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00125	Histone	Core histone H2A/H2B/H3/H4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007125	Domain	Histone H2A/H2B/H3	Interproscan
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR000558	Family	Histone H2B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23428	HISTONE H2B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11252	H2B; histone H2B	-	Exosome	ko04147	deepkoala