Detailed information of FUN_005587-T2 in Dendrogyra cylindrus

Genomic Location: contig_5:9246010...9261127
NR annotation: XP_029201636.2, sodium/calcium exchanger NCL1-like isoform X1 [Acropora millepora]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6K3R5Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL2 PE=2 SV=2
Q5QNI2Sodium/calcium exchanger NCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003989 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699
all species →		Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004713
all species →		FamilyCalcium/proton exchangerInterproscan
IPR004837
all species →		DomainSodium/calcium exchanger membrane regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31503
all species →		VACUOLAR CALCIUM ION TRANSPORTERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006812
all species →		Biological Processmonoatomic cation transportInterproscan
GO:0006874
all species →		Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008324
all species →		Molecular Functionmonoatomic cation transmembrane transporter activityInterproscan
GO:0015369
all species →		Molecular Functioncalcium:proton antiporter activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_005587-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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