Gene detail

Detailed information of FUN_005698-T1 in Siderastrea siderea

Genomic Location: contig_4:9911371...9917993
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_005698-T1

atggcggcgatTCCAGACTGGATCAGCAAAGATGAAGCTCTAACAGAGACATTCAACCGCTTTGATAAAGATTTTACTGGGGAACTAACAGCAGAACAACTGCAGGAGCTTCATGCTGGCGTAAGAGACGGAGGCATTAGTTTGCCGCAAGTTGTGGCCTCGATCGAAGAGGTATGTGCCTGTGAAACTTGCGATAGAGACGAACTTTTCGACGTTCTCAACGAAATGGACCGTAGATATTTTCTCGTTCGTGACTTGCAATGGGAATTTGCTATGCTCGATAGGGAGAATAAGGGAACTATAAGCGAAAGAGATGCAAGGTTTCTTTTTCAAGCCGTCCATGACGACTTTTTCTCGCATCGCCGGTGGTTGAAATTCCTCCGTAGCAGAGCTGCTCCTGGTTCGGGAATTAGTTTCGCGGAAATTGAAGTGCAACTTTGCAATATACCAACCCTGGATTGGCTAGAAGAGGAGAAACAAGATGGCGAAAAGGAGAAAGAAGAGGCTTTGAAACGCAAGCAGGAGAAGgAAAGAGCAGAGGAAGAGGCAAGGAAAGCGGCTGAAAACAAAGCAAGGCTAGAGAAGGAGGCAGCGCGAAGGAGAGAGGATGCATCAAGGAGGAAGGCTGAGGCTGAGGCTGCTAAAAGAAAAGCAGAGCAGGAAGAACTAGAAAGGAAGGCAAGGGAAGAGCAGGAGGAAAGAAATCGCAAGAAATATGAGGAGGAAATGGAGAAGCTTTCTGAAGAGGAAGCAAAACTgagggaagaagaagaaagactTAGAGAGGAGGAAGCAAAGAGATTGGAGGAAGAAGATAGGAAAAGACGGGAACAGGAAGAGGCAGCACAAAAGTGGAAGAAAGAGGAATTACTCAAACAACAGGAACTTGAACGTGAGAAGGAGGAAAGGGAAAGAGCTGAAAGAGAACAACGAGAGAGGGAGGAGGCCATGGAAGCAGAAGATCTTGAAGATGAAGCAGAGGAAGGAGAACGAGCTGCAGCAGAAGCAGCTCGTTTGGCAGCTGAAGCAGCAAAGAAAGCAACTGATGAGGCAGCTCGTAAGGCTGCTGAGGAAGCAGAAAAGAAAGCACTTGCAGAAGCCATGGCAAACAAGGAGAAGAAACTGCGAGCTAAATTAAAAGGAGCAACCAAGTCAAGAAAAGTTGACAGGCTTGAAGGAGCAGTCAAGGAAGCTAAGAGTGCCAAGATGCCAGgTTTGAAGAGTGACATTGAGGAAGCAGAAAAGACTCTTAAGAATGTCCAAGCAGGTGAATCCCTGAGGAGTGCAATAAGACGACGTCACTTAGGCGACCTGGAGAAATCGATGACCCATATCCGCAAAAATGGCTGGGAGAAGGACTGGGGTGTTGAACTCAAGGATGGAGAGAAGCTTGCCAATAGACTGCGTCGTCTTGAGAAATTGAAAGCAGAGATCATGGAACTGAAACAGAGTGTTATATCTGAAATCAGAAGCTATTCGAACCCACCACCTGCCGTTCATAAGGTTATGATTGCAACATACCTGCTTCTCAATTACCCAGAAAAGGATTTATTAAACTGGAAGAATATGCAAGCATTACTTGGGAAGACAGGCAAGGATGGTCTGAAGAGGCAAGTTACGTCTCTGGATCCCTTGCACGTTGACATGGCAAAGGCTGACTATGCCTTTGAAAAGTACCTCAAGGAAACTGATTTGGAGACTATCAGGGATGTCAGTGCAGGAGCAGCAACTTTCTATGTTTGGGCTACTAACATGATAGAGGAAGTCCATGCTGTTGCTGAGCAAAAGGAAAAATTACTGGAggaggaaaagaaaaggaaggagGAAGAAGCAGAAGAAGCCAGAAAGGCAGCAGAGAGAAAGAAAGCTCGTGCATCTGCAAAGAAACCTGCTGCTGTGACAAAGAGAACATCTGGAACACTAGGAGGAAGGACTTCTTCTGATCAGGGGAGCAGGACTTCGCAAGAAACGCGGGGACGAAGTAACTCAAGGGGGAGAGAAGGAAGTAGAGATAGCGTAACCAAGTCACCTGCACGTCCGGGCTTGGCTCGTCGGACAAGTAGCAAGTCACCGGCTGCTCGGAGCTGA

Transcript

FUN_005698-T1

TAGAGCCTCTGACGTCATGGTGTCCAGGCCTACGACGGGAAACaataaacaacatggcggcgatTCCAGACTGGATCAGCAAAGATGAAGCTCTAACAGAGACATTCAACCGCTTTGATAAAGATTTTACTGGGGAACTAACAGCAGAACAACTGCAGGAGCTTCATGCTGGCGTAAGAGACGGAGGCATTAGTTTGCCGCAAGTTGTGGCCTCGATCGAAGAGGTATGTGCCTGTGAAACTTGCGATAGAGACGAACTTTTCGACGTTCTCAACGAAATGGACCGTAGATATTTTCTCGTTCGTGACTTGCAATGGGAATTTGCTATGCTCGATAGGGAGAATAAGGGAACTATAAGCGAAAGAGATGCAAGGTTTCTTTTTCAAGCCGTCCATGACGACTTTTTCTCGCATCGCCGGTGGTTGAAATTCCTCCGTAGCAGAGCTGCTCCTGGTTCGGGAATTAGTTTCGCGGAAATTGAAGTGCAACTTTGCAATATACCAACCCTGGATTGGCTAGAAGAGGAGAAACAAGATGGCGAAAAGGAGAAAGAAGAGGCTTTGAAACGCAAGCAGGAGAAGgAAAGAGCAGAGGAAGAGGCAAGGAAAGCGGCTGAAAACAAAGCAAGGCTAGAGAAGGAGGCAGCGCGAAGGAGAGAGGATGCATCAAGGAGGAAGGCTGAGGCTGAGGCTGCTAAAAGAAAAGCAGAGCAGGAAGAACTAGAAAGGAAGGCAAGGGAAGAGCAGGAGGAAAGAAATCGCAAGAAATATGAGGAGGAAATGGAGAAGCTTTCTGAAGAGGAAGCAAAACTgagggaagaagaagaaagactTAGAGAGGAGGAAGCAAAGAGATTGGAGGAAGAAGATAGGAAAAGACGGGAACAGGAAGAGGCAGCACAAAAGTGGAAGAAAGAGGAATTACTCAAACAACAGGAACTTGAACGTGAGAAGGAGGAAAGGGAAAGAGCTGAAAGAGAACAACGAGAGAGGGAGGAGGCCATGGAAGCAGAAGATCTTGAAGATGAAGCAGAGGAAGGAGAACGAGCTGCAGCAGAAGCAGCTCGTTTGGCAGCTGAAGCAGCAAAGAAAGCAACTGATGAGGCAGCTCGTAAGGCTGCTGAGGAAGCAGAAAAGAAAGCACTTGCAGAAGCCATGGCAAACAAGGAGAAGAAACTGCGAGCTAAATTAAAAGGAGCAACCAAGTCAAGAAAAGTTGACAGGCTTGAAGGAGCAGTCAAGGAAGCTAAGAGTGCCAAGATGCCAGgTTTGAAGAGTGACATTGAGGAAGCAGAAAAGACTCTTAAGAATGTCCAAGCAGGTGAATCCCTGAGGAGTGCAATAAGACGACGTCACTTAGGCGACCTGGAGAAATCGATGACCCATATCCGCAAAAATGGCTGGGAGAAGGACTGGGGTGTTGAACTCAAGGATGGAGAGAAGCTTGCCAATAGACTGCGTCGTCTTGAGAAATTGAAAGCAGAGATCATGGAACTGAAACAGAGTGTTATATCTGAAATCAGAAGCTATTCGAACCCACCACCTGCCGTTCATAAGGTTATGATTGCAACATACCTGCTTCTCAATTACCCAGAAAAGGATTTATTAAACTGGAAGAATATGCAAGCATTACTTGGGAAGACAGGCAAGGATGGTCTGAAGAGGCAAGTTACGTCTCTGGATCCCTTGCACGTTGACATGGCAAAGGCTGACTATGCCTTTGAAAAGTACCTCAAGGAAACTGATTTGGAGACTATCAGGGATGTCAGTGCAGGAGCAGCAACTTTCTATGTTTGGGCTACTAACATGATAGAGGAAGTCCATGCTGTTGCTGAGCAAAAGGAAAAATTACTGGAggaggaaaagaaaaggaaggagGAAGAAGCAGAAGAAGCCAGAAAGGCAGCAGAGAGAAAGAAAGCTCGTGCATCTGCAAAGAAACCTGCTGCTGTGACAAAGAGAACATCTGGAACACTAGGAGGAAGGACTTCTTCTGATCAGGGGAGCAGGACTTCGCAAGAAACGCGGGGACGAAGTAACTCAAGGGGGAGAGAAGGAAGTAGAGATAGCGTAACCAAGTCACCTGCACGTCCGGGCTTGGCTCGTCGGACAAGTAGCAAGTCACCGGCTGCTCGGAGCTGA

Protein

Pfam domain

No Pfam domain signature was detected for FUN_005698-T1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR039724 all species →	Family	WD repeat-containing protein 91	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13083 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031313 all species →	Cellular Component	extrinsic component of endosome membrane	Interproscan
GO:0031901 all species →	Cellular Component	early endosome membrane	Interproscan
GO:0031902 all species →	Cellular Component	late endosome membrane	Interproscan
GO:0035014 all species →	Molecular Function	phosphatidylinositol 3-kinase regulator activity	Interproscan
GO:0043551 all species →	Biological Process	obsolete regulation of phosphatidylinositol 3-kinase activity	Interproscan
GO:0045022 all species →	Biological Process	early endosome to late endosome transport	Interproscan
GO:0051898 all species →	Biological Process	negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction	Interproscan
GO:0141039 all species →	Molecular Function	phosphatidylinositol 3-kinase inhibitor activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_005698-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.