Gene detail

Detailed information of FUN_005699-T1 in Acropora pulchra

Genomic Location: ptg000001l:2821720...2826164
NR annotation: XP_015779644.1, PREDICTED: mitochondrial import inner membrane translocase subunit Tim10 B-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_005699-T1

TCTTGAGAATGGATAAGCGTATGGCAGACGACCTTGCAGCTCGAAATTACAAGGAGTTTCTGCAGTTGTACAACAAGCTGACTCAAAGCTGTTTTCTGGCTTGTGTGACCAATTTTAATTACCGCAAAGTTACTGCCAATGAGCAGTCATGTATAGATGTCTGCAGTTCAAAGTGGATGAATCTTAATCAGCGACAGATGGCTGTGTTTATGGAAGTTGGGCCCTTAGCTGATAGAATGAGAAGCCAAGGAATGTAACTGTTAATCAATTTTCTGGTTTCAAATGTGCTTTTTGATCATTGAATTAAGGTGACCAAACAAAACAAACAAAAGTAGCATTTGGAATTATTTATTTCTAAGGCAGATTGTTTTTCTAACCTCCTCTTTTGAGAAATGCTAGAGATTTGGGCATTTGTTTTACTTCCTATGGCTACATCAGATAACAACAAACTTAAGGCATTTGACTAAAATTATGACAGATGAAATATAAAATATTTAGAAATAATGAGAAAAATAATGGAAAGTTCTTTGCAAGGAGGATATCTTTAGCAATTTGACAAGAATTAACATCAAGAAACTTTCCAAGTTCACTATTACCAAGGAATAAAGAAGAATGAAATGACTGTTTGAAAGAAATATTGGCAGCTACAAAGCTTTTGGTCTTCTGACTACACGGCCCTTAGTTGCTATGGAAACTTAGCATTCCCCTTAAAATGTCTAATCTGGTTGTATTTCCACACTGGCCAATGTCTGGCCAATGTTTGCTGAAGTCACATAGACAGCACTATAAACGTTACAGGAGACAGAAGTCAGGTGGCGGCATTCAGCCATTCAGATGTTGTGGTCAGGCCTTGATTCAGTGTTCTGTATTTCATGGGTTTGTGCTTCAATATGGGCTGTATAGCCTGTCTGCACCTTTCTCTCTTGAACTGATCTCTCCATAAAAATGCTTAAAGTAAAGTAAAGTTTCGGTCACAATGGCAGCCTGAGTAGTGTTGGAGGGTTGATTTTCATTGCCTTTATTTCCTGACACAAAATTGTTGAGGTTGAAGAGAAGATTGAGGAGACACATGGTTACCTTTTTAAATTAACAACATGCCTCTCCATTCCATTAGTTTTCCTGTCTGTCAAGGGTTGCACATGTATTTTGCCCACTCCTTAGGCTACTAGTACTAAATTAGGCTAGTCTCAGTTCACTTTTTGAAACACTTGACCATGATAAACTGTAATAATGTGTGGCTGAAAAGATAACAAATTAAAGTATTCATTGGGGAAAGTATATTATCATGAATACACAAATAGGTAATATAATACTCAGCCTTCTGAACACGAAAAAATTTATTCCTTATTGATACCAAAACATATATACATAATACAATGTCTACTTTTTACATAATTTAAGAAAAAAAGAACTGTACAAATTCTATTTATAAGTTGTTGGTGAAGCAACCAACCAACAGTTGTTAGCTGCAGTTTCCCCGGTGACTTTAATCTTAAAAATAAGGAAATGCAGTCAACTAGTGTATTACTTTGTCATTACTTAATTCTGTTGCAACGTTACCCTACTCAGCCAATTACAATAATACTGTTGTAAGAGACACCCCAATAACCATGTCACAGTGACAATAGTCCAAGGAAATTCATTGACCTATCACATTAATACGCAATTCACCAATAATGCTACTTTCATTTGCAATTTAGAGGTTATTACAGGTGATTATTTAGTTTTGTATAGTTGTGTCTGCAAATTTGCATGGACCTTGGTGCGACCCCATGTAATTTGAATCAATATGTTTTATAATACTTCTTGTTTGGCAACAGCATCAGAAAAACAGAGGCTTGAATTGCCTGTGGTCAGTGAGTCAAATTCATTTAAAACCAGGGAAATGAGCACATAATTGCTGTAAAATAGTTTTGTGCTACGTACTCTATCAGTGGAAAATTAGTCATTTTGATCACTAACATTTCTATTCCTTACAATGGGCCATGTTCGATATATCAATATTCTAACACGGCTCCGAGGCTTTCAGGTCAGACTTCTATATTAAACTTTGGTGTTGTTTTCTTTGTATCCAAGTCTCTTTTGGGAATCGAGAGACAAGAGAAGCGTGAAAAATTAGCAAGTTTTACCTGAAAGCCTCGCAGTCATGTAAGAATATTGGCCTATTGCCAACAAGCAAGTGGCTGTAAAGCAGCTCCCCCAAAGATCCCACATTTTAGGTTGTTCCTTATGCAGAAAAAAGTCCTAAGTAAGGGTCCAGTCATCATTTAAGTCAGGGGTGGAAAAAATGTTTTTACTGCAAAAAAATTCCCAGACCCCAACCTGATAGCATTCATGTGCTGCGGGTACTGCCTTTGGGTACTGCCTTTGATCGTTTAAGAAAATTAAGGACCCCTTTCAAACATAATACCAAAATATGTTAAATGAAAGTTTCTTGCTTTTATTAAAAACCCTGTTGGCTTCCCCCAACCCTCCTGACCTTTCAAGGCCCCCCCATGTTCTACTAAAAAAAATTGAGAGCCCCCATTTTCTACACCACCCCCCCTCCAACTTAAATAATGACTGGTCCCTATGTGTAAGGCAAACTAATGTAACAATAGGTTGTCATACAATTTGAAAGGATCATTCACACTGCATGCTATTCAGAATAATGACATCATAGCTTACTGCTTGTTACTATTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GR66	Mitochondrial import inner membrane translocase subunit Tim10 B OS=Xenopus laevis OX=8355 GN=timm10b PE=2 SV=1
Q568N4	Mitochondrial import inner membrane translocase subunit Tim10 B OS=Danio rerio OX=7955 GN=timm10b PE=2 SV=1
Q9Y5J6	Mitochondrial import inner membrane translocase subunit Tim10 B OS=Homo sapiens OX=9606 GN=TIMM10B PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007352 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02953 all species →	zf-Tim10_DDP	Tim10/DDP family zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004217 all species →	Domain	Tim10-like	Interproscan
IPR035427 all species →	Homologous_superfamily	Tim10-like domain superfamily	Interproscan
IPR050673 all species →	Family	Mitochondrial import inner membrane translocase subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13172 all species →	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042719 all species →	Cellular Component	mitochondrial intermembrane space protein transporter complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_005699-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.