Gene detail

Detailed information of FUN_005748-T1 in Siderastrea siderea

Genomic Location: contig_4:10640855...10721619
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_005748-T1

ATGGCGACTCGTTTAAGCGTTTGTTTTTATCTATTTTTCATCTTGCTCCCGACGTTTGCAAGTTGCATTCGTCCGTTTAGAGTTCCAAGGAATCTCTTCGTGCAAGGCACGTCGCCATTCACCCTTCCCGAAGGAGCGCGTGTGATAAGGCGGGAGGCTGACGAACCAGAGTTGGAAAGCCCTCAAGAACTCGTGGAAGACCTTCGAGGTCGTTTTCGTCGTGAAAGCCCTATTCCGGAGCCTCAACCGGAGAAATCCAGCCGATCTCTTGCAAGCGGCTTCGATACTCTCTACATGTACTGGCCTCCAGAtagcgaaaaagaaagcaacGTATTCCTGCTAGCCAAGAACGTCAAACGTGGCAGTAAATCTATCAGCAAGGTTTATGTGTCGAAAAATTATGGCAAGAATTTCACCGATCTGGACGCCCAACTAGTCTTGCAGAACAGAACAGCAGCCCTGATCGATCAGATTTATTCGTCAAAAGCGGATCCAAAACTTTGCATTCTGGCCGATAAAAAGCACAAAATTCTCTTCCGCTCAGTGGATTTGGAAACATTTAAACGATCTAATGTTAACTTTGTGCCATCCTACATCACGTTTCATCCATCAGATGCTCAGTATGCCATGGCATACGATGCCCCAGCTGAAAAGctTTACTGGTCAAGCGATAAGGGAAAAACTTTTAACCCAGTACTGGGAAAAGTCAAGTCTTTTAATTGGGGTGTGGAAGGAATTCACCAGGGAGAGACAGCATTTATTGAGAAGTTCAAAGATGACCGTGataCCTCAAAAGATAACAGAACTGAAATTTATGAGTTAGCCAATGGCCAAATTGCAGGAGGCCCACTTGCCAGTGATGTGGAGGAATTTGAAATGATGAAAAACTACATGTTTATCACAACACGCAAGAATCCTGGAGACAAAAATCCTATTCTGAAGGTTGCTAAGGTCACTAAAGGCCAACCAGCCTTCTCCCAGTTTAGAGAGACACAGTTTCCTCTGAATGAGGAAAGCAGGGACTTTTTCGTCTTTGACGTGGTAGAGGATTATGTATTTGTGGTCATTAATCATATGAGGAATCTGTCAAATATGTACTTGTCTGATGCTAATGGTATCAAATATCAGCTGTCCTTGCCGAGGGTGTTATATCATAACCCCTATACAGATGTGTCATCTCCGTGGCTCAGAACTGTGATTCCTTATGCATTTGTCGATGTGGATAGAGTCAAAGGCATGCGTGGTATTTACGTTGCCACCCAGCTGACTCCTGGTCCAGTTGGCAAGAGACATCTTCTGTCACTCATCACCTATAACAGAGGAGCAAAATGGCAGAAAGTCCGCTCACCCACTGTGGATAACCGTGGTGTCAGAATAAACTGTTATCTGCCCAGCTGTTCCATTCATTTGAATCTCCTGTATGGTGCTGTGTATCGTGTGTCTCCATCAGAACGTTTGTTCTCCAGTGAATCTGCTCCTGGGCTGGTTCTAGGATTAGGTGTGGCAAGCACTAACCTCAAAATATACCCTGACCTCTTCATGTCTTTGGACGGAGGTCTGGGGTGGAGCCGGGTTCTCAGAGGAAAGTATTTGTTCACTTTTGGTGATCATGGAGGAGTAATAGTCGCTGTACCCTTCAGACGTTATACCAGGATACTGAGGTACAGCATAGACGGTGGAGCGACATGGAAAAGCTACACCTTTAGCTCCAACAATATTCTGGCTCGTGATGTTGTCACTCAACCAGGTGAACGGCTTCCAGTTTTCCTCATTTACGGATCCCAGCAGAGTGTTCGAAATACTTGGACCGTGTTTTACCTGAACATGACATCAGTCTTAGGTCCAGTCTGTGATTCCTCTGGCTATACTACATGGACTGATGGATGTCTTTTAGGGCGGCAGCAGCAGTTTGAGACAAGAAACTGGACCATCCATTGCCACATGAGTCGAGACTACAGAAGATCTATTTTCCTTAGGAATTGTCCTTGCACACGAGATGATTTTCAGTGTGACTAtggttttgaaagaaaatcaattGAAGAGGAGTGTACTCCCATCCGCCAAGGTGAAGATTTGGATCACCAGATTATCCCGAACAACTGCACGGAGGGTGCAAACTACACCAGAACTAGAGGATTCCGTAAGATCACAGGAGATACGTGTGTCAATGGAAGCGAGGATGAATTCTTGCCAGTGTTAACACCTTGTCCTGTTCAAGAACTATATAATTTGTCTGTCACCTGTTCTAATGTGACTGAAGATGGCTTTTGTGCGATTGTAACTGGAGGGACTGCTTCTTTTATGGCTGGGGTTCAAAAGGGATATTATCCAAATATTAATTTTAgGTGGTTTTGTGGTGATGGTCATGAAGACACAGGAGCTGGAAAGAAGGCTGCTTCTCAACAGCATAAATATGACAAGCCGGGAAAGTACATTGTGGCAGTTGTTGCATCCAACACTCGAAGCATTCTCGTGACAAAGCTGGAACTGACTGTTGTAGAAAAACTGGATGCCAATAAAGTGGCCATCAAATTTCATCCTAAAAACCCTGGAGTGGATGAAGATGTGATCTTTTCTGCAAATCTGAATTATTCAAATGAGGAAGTGGGTAATGTTCACTACAAATGGAAGTATGAGGAGGGAGAGATACAAGGATGGCAGCCAGTTGCCACTCTACGATTTGCAAAACCAAAGACGTACATTGTTCATATAACAGTGAAGAATTATGTGAGCTCTGTGAAACTGACACAGTCAGTCCAAGTCATCATCGATCTTACTCCAATGAATGTGACTGCCAGTGTACTTGGACCCTCAAAAGTTCTAGTACAATGGAAACCTCCAGCGAAAGCAGACAGTTCCATAAAGTACAAGGTTTATCAGAGCTCTTCAGGTAATGTTGGCTACCAAGAGGCATCATGTGCACGGTTAACAAGCACATCTTGTACAGTAGACAAGCTAACTCCAGCTACTACATACTACTTCAAGGTCCAAGCAGTCAATGCTCAGGGTGACAAGGGACCTCTTTCAGACTTTGCTGTTGCCACAACAAACACCACCACTCCTGGAGCCCCAGTTGACTTACATGCGTATCCTCTCAGTGACTCCAGCATCAAGGTGGAGTGGAAAGCTCCTCCTAACCCAAACGGACAGATCACAAGTTACACCattAACTATTGGTCACATCATCTACCCTTATCAGTACGTAGTTATGACAATGGCCTTAAACTGTCAAAAGTGTTCACTGGGTTGGGTCAGGATACCTATTACTTCTTTGAGGTGTATGCAAAAAGCTCAACAGGTCGTAGCATATCCGTCGGCCCTGTCGAAGCACTAACAAAGTTATCAAaaCCAACACTCCCACCACGGGAAATTAAGAAAGTTTCTGACAATGGCACTTGTGCAATGTTGACATGGACGGCACCATACCTGTCACTTACAGACAACAGGACATTTCCAGCTAAGGGTTATAAAGTCCAGGTGGATGGCAAGCCTGCCTTCAGTGTACCTAAAGCATTTGCAGTTGTCTGCCAGCTAACACCTGGAAAAGAGTATGTTGTGAAGATTTTGGCATATTCTCAGGCTGGAAATGGACCAATGTCACCAATTATTAAGTTCTCCACTCAAACTATCAAGCCAGGGGCCCCTCGGAACTTTAGATGCACTCCAGCTTCTGCCACACAATTAATACTAACATGGAACCCTCCTCTACAGAGCAGCTCTGGAGTAACTGGCTATGAAATTTACCAGgaAGACCCATACAAGGCAAAGCCTTTTTCTGTTGGACCAATTCCTCAAAGTTTGAAGGTTCAAGGACTCAAACCATTCACCGCTTATAGATTCAGCATTTTGGCCAAAAACAGCATGGGCTCTAGTGTCAGGAGTTCGCCTGTGGAATGTACAACCCAGCAAGACACCCCGGGGATTGTGGAGTATGTTACTGCAGAAGCCATCAAACCCAGGTCAGCAAGTATACGCATCACATGGTCCACACCAAAAAATCCAAATGGGGACATCAGACAATACAAGATCAAGTGGGGAAAGACTGTTGTTGATGAGCAAACAAATTTGGATGGCTTAAATCAGTTAGTTGTTAATGGTTCAACTCATGCATACACATTTAAGCATCTCTTCAGCAGTACAACCTATTCCTTTGTTGTGATTCCAAAAAATGGTCATGGAGAGGGAGCACGACACAGAACACCTAAAACTGAAAGAACTTATCCAGCTAAAAAAGGCACAGAACGACTTAAGCTTGAAATTGATGGTGCCAATATCGAAGGTGATGAGTGGGAGTTTATTACAGAATTCATCAAAGCTGCAAGCAAAAAGGCTGGAATACTAGATGATCGCTTAGCTGCTGTTGAGGTGAAGGAAATGGGTATAGTTCTGTTTGATCTACTCCTTCCACTTAGTGCCTCAGGTGTTTCAATGGAAAAGGCCAAATCAGCTCTCAATGCTGGGTTTAGCGTATCAGATTGGATGATATCTGCTGGCTCTTTAAAGCGTGTTTCTGTCTACACTGGAAGTGGAGGAGAAATTTCACCATCACCAGTGAAACCCACTGTTGCGGCACAGAGAGGTGGAGGGTCAGGGAGCAGCAGCTCAAAGAAAACTTATTTAGCTATTGGCATACCTCTTGCAATGATAGTAATAGCTTTGCTAGGTGGCATGATATTTTACTACATGAAATACAAATCACTTGAGAAGCACTACAGACAAATGGGAGACCAAAACCACGAGGAGGATGAAATGAAAGATATTTATCATGAGGACCTGCAAGGGGATTCTCCTGATGTGATTTTCAGTGACCGCACAAAAAAGGGAAGGTCAAAGGTGTACAGAGATTCTGAGAAAGTTCCTCTAGAAGAACATGATGAGCTGGCCATGATTTAA

Transcript

FUN_005748-T1

CCGGATATATAAATTTATTCTTTGACATtcgaaaaacaaatttaaaatgttAATGGCTGACATTTCAGGTCATTTTTTAGCAACATCTGGACTTTTAAACACATATTCTAAGCTAAGTTTAGAAGCGCGAGAAACTAAAATCGTGTGACGTGACAGTATTTCGGGAGCTTTGCCAACAGTCTTGTACTCTTGTTCCGGCCAGAATACTTGAGGAAAAAAGGTACTCGTCATTGCTTCCGGCCTTGCTTCAGGTTTTGAGTTGCTTTTTGGTTCCGCTTAATATACCACTCTATATGGTAAACCAAATACGAGCGACTCAGCACAGACTACGTAAAAATCAAATCTTTTTCAACGCCATTTGGCAACAGAGACAACAGAGAGCAATAGAGTAAAGGCAGACAAAAGGACGAAAATATCATTGAAGCCTCGACCCCCCGCAGTTGTAATTCAATAGCCTCGCTCCTGTGCAAGACTAGTAGTACTCGCGCTATATGCTAGAACGTGTGAAGTTCTCTGGCTTGTAGTGAGAGATGGCGACTCGTTTAAGCGTTTGTTTTTATCTATTTTTCATCTTGCTCCCGACGTTTGCAAGTTGCATTCGTCCGTTTAGAGTTCCAAGGAATCTCTTCGTGCAAGGCACGTCGCCATTCACCCTTCCCGAAGGAGCGCGTGTGATAAGGCGGGAGGCTGACGAACCAGAGTTGGAAAGCCCTCAAGAACTCGTGGAAGACCTTCGAGGTCGTTTTCGTCGTGAAAGCCCTATTCCGGAGCCTCAACCGGAGAAATCCAGCCGATCTCTTGCAAGCGGCTTCGATACTCTCTACATGTACTGGCCTCCAGAtagcgaaaaagaaagcaacGTATTCCTGCTAGCCAAGAACGTCAAACGTGGCAGTAAATCTATCAGCAAGGTTTATGTGTCGAAAAATTATGGCAAGAATTTCACCGATCTGGACGCCCAACTAGTCTTGCAGAACAGAACAGCAGCCCTGATCGATCAGATTTATTCGTCAAAAGCGGATCCAAAACTTTGCATTCTGGCCGATAAAAAGCACAAAATTCTCTTCCGCTCAGTGGATTTGGAAACATTTAAACGATCTAATGTTAACTTTGTGCCATCCTACATCACGTTTCATCCATCAGATGCTCAGTATGCCATGGCATACGATGCCCCAGCTGAAAAGctTTACTGGTCAAGCGATAAGGGAAAAACTTTTAACCCAGTACTGGGAAAAGTCAAGTCTTTTAATTGGGGTGTGGAAGGAATTCACCAGGGAGAGACAGCATTTATTGAGAAGTTCAAAGATGACCGTGataCCTCAAAAGATAACAGAACTGAAATTTATGAGTTAGCCAATGGCCAAATTGCAGGAGGCCCACTTGCCAGTGATGTGGAGGAATTTGAAATGATGAAAAACTACATGTTTATCACAACACGCAAGAATCCTGGAGACAAAAATCCTATTCTGAAGGTTGCTAAGGTCACTAAAGGCCAACCAGCCTTCTCCCAGTTTAGAGAGACACAGTTTCCTCTGAATGAGGAAAGCAGGGACTTTTTCGTCTTTGACGTGGTAGAGGATTATGTATTTGTGGTCATTAATCATATGAGGAATCTGTCAAATATGTACTTGTCTGATGCTAATGGTATCAAATATCAGCTGTCCTTGCCGAGGGTGTTATATCATAACCCCTATACAGATGTGTCATCTCCGTGGCTCAGAACTGTGATTCCTTATGCATTTGTCGATGTGGATAGAGTCAAAGGCATGCGTGGTATTTACGTTGCCACCCAGCTGACTCCTGGTCCAGTTGGCAAGAGACATCTTCTGTCACTCATCACCTATAACAGAGGAGCAAAATGGCAGAAAGTCCGCTCACCCACTGTGGATAACCGTGGTGTCAGAATAAACTGTTATCTGCCCAGCTGTTCCATTCATTTGAATCTCCTGTATGGTGCTGTGTATCGTGTGTCTCCATCAGAACGTTTGTTCTCCAGTGAATCTGCTCCTGGGCTGGTTCTAGGATTAGGTGTGGCAAGCACTAACCTCAAAATATACCCTGACCTCTTCATGTCTTTGGACGGAGGTCTGGGGTGGAGCCGGGTTCTCAGAGGAAAGTATTTGTTCACTTTTGGTGATCATGGAGGAGTAATAGTCGCTGTACCCTTCAGACGTTATACCAGGATACTGAGGTACAGCATAGACGGTGGAGCGACATGGAAAAGCTACACCTTTAGCTCCAACAATATTCTGGCTCGTGATGTTGTCACTCAACCAGGTGAACGGCTTCCAGTTTTCCTCATTTACGGATCCCAGCAGAGTGTTCGAAATACTTGGACCGTGTTTTACCTGAACATGACATCAGTCTTAGGTCCAGTCTGTGATTCCTCTGGCTATACTACATGGACTGATGGATGTCTTTTAGGGCGGCAGCAGCAGTTTGAGACAAGAAACTGGACCATCCATTGCCACATGAGTCGAGACTACAGAAGATCTATTTTCCTTAGGAATTGTCCTTGCACACGAGATGATTTTCAGTGTGACTAtggttttgaaagaaaatcaattGAAGAGGAGTGTACTCCCATCCGCCAAGGTGAAGATTTGGATCACCAGATTATCCCGAACAACTGCACGGAGGGTGCAAACTACACCAGAACTAGAGGATTCCGTAAGATCACAGGAGATACGTGTGTCAATGGAAGCGAGGATGAATTCTTGCCAGTGTTAACACCTTGTCCTGTTCAAGAACTATATAATTTGTCTGTCACCTGTTCTAATGTGACTGAAGATGGCTTTTGTGCGATTGTAACTGGAGGGACTGCTTCTTTTATGGCTGGGGTTCAAAAGGGATATTATCCAAATATTAATTTTAgGTGGTTTTGTGGTGATGGTCATGAAGACACAGGAGCTGGAAAGAAGGCTGCTTCTCAACAGCATAAATATGACAAGCCGGGAAAGTACATTGTGGCAGTTGTTGCATCCAACACTCGAAGCATTCTCGTGACAAAGCTGGAACTGACTGTTGTAGAAAAACTGGATGCCAATAAAGTGGCCATCAAATTTCATCCTAAAAACCCTGGAGTGGATGAAGATGTGATCTTTTCTGCAAATCTGAATTATTCAAATGAGGAAGTGGGTAATGTTCACTACAAATGGAAGTATGAGGAGGGAGAGATACAAGGATGGCAGCCAGTTGCCACTCTACGATTTGCAAAACCAAAGACGTACATTGTTCATATAACAGTGAAGAATTATGTGAGCTCTGTGAAACTGACACAGTCAGTCCAAGTCATCATCGATCTTACTCCAATGAATGTGACTGCCAGTGTACTTGGACCCTCAAAAGTTCTAGTACAATGGAAACCTCCAGCGAAAGCAGACAGTTCCATAAAGTACAAGGTTTATCAGAGCTCTTCAGGTAATGTTGGCTACCAAGAGGCATCATGTGCACGGTTAACAAGCACATCTTGTACAGTAGACAAGCTAACTCCAGCTACTACATACTACTTCAAGGTCCAAGCAGTCAATGCTCAGGGTGACAAGGGACCTCTTTCAGACTTTGCTGTTGCCACAACAAACACCACCACTCCTGGAGCCCCAGTTGACTTACATGCGTATCCTCTCAGTGACTCCAGCATCAAGGTGGAGTGGAAAGCTCCTCCTAACCCAAACGGACAGATCACAAGTTACACCattAACTATTGGTCACATCATCTACCCTTATCAGTACGTAGTTATGACAATGGCCTTAAACTGTCAAAAGTGTTCACTGGGTTGGGTCAGGATACCTATTACTTCTTTGAGGTGTATGCAAAAAGCTCAACAGGTCGTAGCATATCCGTCGGCCCTGTCGAAGCACTAACAAAGTTATCAAaaCCAACACTCCCACCACGGGAAATTAAGAAAGTTTCTGACAATGGCACTTGTGCAATGTTGACATGGACGGCACCATACCTGTCACTTACAGACAACAGGACATTTCCAGCTAAGGGTTATAAAGTCCAGGTGGATGGCAAGCCTGCCTTCAGTGTACCTAAAGCATTTGCAGTTGTCTGCCAGCTAACACCTGGAAAAGAGTATGTTGTGAAGATTTTGGCATATTCTCAGGCTGGAAATGGACCAATGTCACCAATTATTAAGTTCTCCACTCAAACTATCAAGCCAGGGGCCCCTCGGAACTTTAGATGCACTCCAGCTTCTGCCACACAATTAATACTAACATGGAACCCTCCTCTACAGAGCAGCTCTGGAGTAACTGGCTATGAAATTTACCAGgaAGACCCATACAAGGCAAAGCCTTTTTCTGTTGGACCAATTCCTCAAAGTTTGAAGGTTCAAGGACTCAAACCATTCACCGCTTATAGATTCAGCATTTTGGCCAAAAACAGCATGGGCTCTAGTGTCAGGAGTTCGCCTGTGGAATGTACAACCCAGCAAGACACCCCGGGGATTGTGGAGTATGTTACTGCAGAAGCCATCAAACCCAGGTCAGCAAGTATACGCATCACATGGTCCACACCAAAAAATCCAAATGGGGACATCAGACAATACAAGATCAAGTGGGGAAAGACTGTTGTTGATGAGCAAACAAATTTGGATGGCTTAAATCAGTTAGTTGTTAATGGTTCAACTCATGCATACACATTTAAGCATCTCTTCAGCAGTACAACCTATTCCTTTGTTGTGATTCCAAAAAATGGTCATGGAGAGGGAGCACGACACAGAACACCTAAAACTGAAAGAACTTATCCAGCTAAAAAAGGCACAGAACGACTTAAGCTTGAAATTGATGGTGCCAATATCGAAGGTGATGAGTGGGAGTTTATTACAGAATTCATCAAAGCTGCAAGCAAAAAGGCTGGAATACTAGATGATCGCTTAGCTGCTGTTGAGGTGAAGGAAATGGGTATAGTTCTGTTTGATCTACTCCTTCCACTTAGTGCCTCAGGTGTTTCAATGGAAAAGGCCAAATCAGCTCTCAATGCTGGGTTTAGCGTATCAGATTGGATGATATCTGCTGGCTCTTTAAAGCGTGTTTCTGTCTACACTGGAAGTGGAGGAGAAATTTCACCATCACCAGTGAAACCCACTGTTGCGGCACAGAGAGGTGGAGGGTCAGGGAGCAGCAGCTCAAAGAAAACTTATTTAGCTATTGGCATACCTCTTGCAATGATAGTAATAGCTTTGCTAGGTGGCATGATATTTTACTACATGAAATACAAATCACTTGAGAAGCACTACAGACAAATGGGAGACCAAAACCACGAGGAGGATGAAATGAAAGATATTTATCATGAGGACCTGCAAGGGGATTCTCCTGATGTGATTTTCAGTGACCGCACAAAAAAGGGAAGGTCAAAGGTGTACAGAGATTCTGAGAAAGTTCCTCTAGAAGAACATGATGAGCTGGCCATGATTTAAGGAGTATTTTTCTGCACTTCCTTGTTAGTTTTTTTTACTTAAGAGGTGTAGCACTTAATTTGTATGTAAAATGATTCCAATAAGTAATTAACTTGGTGTTAAGGTGTCACTATTTTCCACTTATACCTGTCTACCTAGGTAATTTACAGTCACAAGGTTTTAGATTTAGGCAGCATTTACCATAGATTCAGAATTTGTTCTCGTAATgcggttctaagttttgagtctgtgcgTGAAATCTCTCAGCTATTGGGTAGTACTAGAATGTGGCACTGTTTTTTATGCTGCAGTGGTTCTCACctttgggtctgtggatgaaatccttaagacCACCCAAATGGACGTTACTGAGTGGATCTTTCGTATGGTGTTGTTCGTTTGTAAAGTATTTTCCTAGTGgaaaagtttcaaaattttgtcaTGTTTTCTTAGCACCCTAAGAGCTAGTAATACAGAACTAGAACCCGTTGTGTGTTGAAATAGCAGTAGTCATTTCATTTTGGATCATTTAAGTCCTGAGTAGAAATCTCTTTGTAGCTTTGGTATATTTTTATAGCTCTCTTAGGGAGATTTAGCTTAAATATTAGACTTCATTGGTGTCAAGAGAGAAAATCTAGAGTTCTTATGTCATTAGTAGTTAAGAACAAAAACTGGCAGTAAGAAGTCAATACCCTCTCGTTAGTCCTTTTAATTCTGTGAGACGTTATGTGCTAATTTTAGTGACAGTGCGAAGTCGAGATGCCCTCTCAGGAGGAAGTATCTTaagaaaattaataagaaaTAAGATAAATTGGAATACCTTTGATAGAGTGATTTTCGATCGGGATTCGAAAGTTGGGCTTCCTTTGGTTTTGCTTAGTACACTTGTGCAACCTTCTCAACCAATACAAAATGAAACCAAACCCAATTGTGTCTTTGCTGCTCGCATTTTCGTATGCTTGGCACCTGTTTCATGTATTTGcctcgagttctgattggttgcttgGGTAAtttgttgtgtttgttgtgGTTGGCTTGAAtaatttctttggttttggttttacaaagCTCAACTGGAATTCACGTTAATGTAACTACAGACGAAAAATACCAGTTTCCTTCACAAAGAGATTCCTTAAGCAGTGTTTCTAGTGGGTGACATTTTCAGTGTTGAATGGACTGAATGAAAGTAGAATGCTAGAAAACGGGACTCACTGTATAGGCATGTGGCAGTAATATGTTCCTTCTTAAAGAGAGACAGTTAATTGCAGGGATAGTAGCTTTGCTCAAGATTTGCAAacatttgtaacattttttgggccttaaaaaagtgttgaaaatGTTATGAATCTTTTCTCTGCTGCTTAGCAAAAGCATTATTCATGTGTACAGCCAACTTGAAGCTTATGTACCAGTATCTGATTGAATCAAATTAAGTGTTGCAGCCTGTGTAAACAGAAAGGTTTGGGTGCAGCACTAAACATTTTACCCAGAAGTAACATCTGAACAAAGACGTAAAAATCTTCTTTGGTGATTTGATTGGCTGCGAAACATTCGAAACCTAGCCAGAGGCATTTCCAGGAATTTAGAATCGAAGTTTGGAATACTGGGCTTGCCGCCAAAATTTCGTATTTCTTTGAATCTAGAACTCTGAAAGTCTCAGACCTCAGAGTAACCCACTGCACAGTAATGAATTATGTTGTGGCGTATTTTCACATCTCAGATTTGTAATTCTATGCCCATTTATCAAATTTCTGTAGTGGAACACCATCCCATCAATATGGATTTTCAGTCTTTACAGATGTTACTCTGCAGGAGAAGGTTTAATGCCACTGTGAGCTGTTGTTTGTTCAAAACTGTAGCGCTTGCTGGGTATTTACTTTATGCAATAATATTTATCATGTTGCTTTCAAAATCTTTAATGTGCACTGTATCCAAAAGGAAGTTTAAAAAGCTTTCGATTTATTATACTGCTAGCTTGTAAAATTATTAAACATTGAGGTATCTGATACCTATTTATAAGGGCATTTCCAAAGTTACTGTGGGCAGATCAAAAAGTGTGAGCACTAAATACTTGTGGATTGTTACCATGAGGTGGGAGAAAACAAGGAAGATGGGAGGTCATTAAACTGCAAACTCTAACAGAAATTGTTATCCTTGTGGTCTGATCTCCCACCTGGTTGGCCTCAGCACTACAGTTAATAATATCAAAGTCAAAGAGTTCACACTTTGGATTCAGACAGTAATGGAGATCTACTTCACTAGTAtatttttgcataatttgtatcCTCTTTTTATAGTTGAAAACAATAACTACAATTAAACCCCTTTGTTTTGCTGTTTATAAGGTGTAATGTAATCAGGTTCACCAATACATGTTTTTGGCAAGTTAATTGTGTAGCCTTATTAAAGGATCGTTTTGGTAAAAGGTCTCTAATAATTTGAGGATCTGTGTCTACTGTGACTCACGGGGTTCAGAATTCTTGGGTGCTGTTACACAGGGCAGTTTGTCTCACAACTTGCAATGCAGGGCTGACATGGGCATTACAAGGCAAGGTAGTTTTTCTCATAAAGCAAAACTCTGTAATGTTTTGTGCAACTTGGCTGGCAATGCTATTACTGTCTCGTGGAAAGTTGTAGGACAAATTTCCCAATGTAAGGGTATTTTTACACTTTTTCAGAAGGAATTCTCAGATGGCCAGATAATATTAGAGTCGCAAACCATGTGATTCCAGTCACTGCACATGGCATCATGATGAATGTGCTGACCGGTGTAGGAGGGTCATGGAACAAAAAATACTGCACAAATTAAAGCGGCATCATTGAAAGGTTTTTGGACTCGAGGTTATCTGTTACCTAGCTGTCAGTACCAGTGGAAGAACATGACAGCTTTCACAGGCAAACGCTGAACTTTACAACATAGGTCAAATGTCTGCAGTGTTTGGTGGATTTTGATCCACtttgttgtttctgttttgaGCAGTCTTAAGGTTTTTGATATAATTATGCCTGAGGACAGTACAGAAATCATCACCATTGGTTGGGttgtagcctgcata

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF15901 all species →	Sortilin_C	Sortilin, neurotensin receptor 3, C-terminal	Domain	Interproscan
PF00801 all species →	PKD	PKD domain	Domain	Interproscan
PF15902 all species →	Sortilin-Vps10	Sortilin, neurotensin receptor 3,	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR031777 all species →	Domain	Sortilin, C-terminal	Interproscan
IPR000601 all species →	Domain	PKD domain	Interproscan
IPR006581 all species →	Domain	VPS10	Interproscan
IPR003529 all species →	Conserved_site	Long hematopoietin receptor, Gp130 family 2, conserved site	Interproscan
IPR031778 all species →	Domain	Sortilin, N-terminal	Interproscan
IPR050310 all species →	Family	VPS10-related sortilin family receptors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12106 all species →	SORTILIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004896 all species →	Molecular Function	cytokine receptor activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006892 all species →	Biological Process	post-Golgi vesicle-mediated transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_005748-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_005748-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

76TPM > 0

7Conditions

219.7Max TPM

31.9Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	17	23.86	73.67
holobiont · low.pH Control.temp	20	17	22.10	47.59
holobiont · control.pH_high.temp	20	19	22.87	70.93
holobiont · control.pH Control.temp	19	17	21.04	63.73
Whole organism	4	4	175.10	219.69
unannotated	1	1	71.25	71.25
live coral tissue/skeleton	1	1	166.73	166.73

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	73.67
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	60.89
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	37.02
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	36.50
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	32.80
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	29.34
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	28.05
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	27.07
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	25.26
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	24.31
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	21.96
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	21.86
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	18.28
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	13.97
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	11.92
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	7.56
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	6.70
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	47.59
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	41.49
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	38.74
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	37.99
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	33.11
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	31.82
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	31.40
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	30.10
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	25.30
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	23.19
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	22.31
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	21.75
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	15.76
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	14.83
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	12.74
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	10.02
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	3.95
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	70.93
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	50.83
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	48.20
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	44.55
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	28.45
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	28.39
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	25.38
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	24.66
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	20.16
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	17.25
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	14.66
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	14.65
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	14.01
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	12.85
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	12.45
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	12.23
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	7.32
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	5.45
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	4.99
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	63.73
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	45.85
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	42.03
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	37.38
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	37.18
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	33.66
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	25.70
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	25.60
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	16.18
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	14.36
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	13.75
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	12.95
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	10.04
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	7.35
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	7.31
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	3.69
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	2.95
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	219.69
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	186.52
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	150.58
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	143.61
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	71.25
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	166.73

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.