Gene detail

Detailed information of FUN_005893-T1 in Acropora pulchra

Genomic Location: ptg000001l:5364003...5380920
NR annotation: XP_029213123.2, serine/threonine-protein phosphatase with EF-hands 2-like isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G5EBX9	Serine/threonine-protein phosphatase with EF-hands pef-1 OS=Caenorhabditis elegans OX=6239 GN=pef-1 PE=1 SV=1
O14830	Serine/threonine-protein phosphatase with EF-hands 2 OS=Homo sapiens OX=9606 GN=PPEF2 PE=1 SV=2
Q3SWT6	Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus OX=10116 GN=Ppef1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007124 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08321 all species →	PPP5	PPP5 TPR repeat region	Repeat	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF00149 all species →	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006186 all species →	Domain	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR013235 all species →	Domain	PPP domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR004843 all species →	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR051134 all species →	Family	Protein Phosphatase PPP	Interproscan
IPR012008 all species →	Family	Serine/threonine-protein phosphatase with EF-hands	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45668 all species →	SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004721 all species →	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0030145 all species →	Molecular Function	manganese ion binding	Interproscan
GO:0050906 all species →	Biological Process	detection of stimulus involved in sensory perception	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13807	PPEF, PPP7C; serine/threonine-protein phosphatase with EF-hands	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.