Gene detail

Detailed information of FUN_005963-T1 in Colpophyllia natans

Genomic Location: contig_7:3713014...3721422
NR annotation: CAH3110792.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O73718	T-box transcription factor TBX3 (Fragment) OS=Gallus gallus OX=9031 GN=TBX3 PE=2 SV=1
Q7ZTU9	T-box transcription factor TBX2b OS=Danio rerio OX=7955 GN=tbx2b PE=1 SV=4
Q3SA48	T-box transcription factor TBX2 OS=Xenopus tropicalis OX=8364 GN=tbx2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	T-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00907	T-box	T-box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002070	Family	Transcription factor, Brachyury	Interproscan
IPR001699	Family	T-box transcription factor	Interproscan
IPR046360	Domain	T-box transcription factor, DNA-binding domain	Interproscan
IPR018186	Conserved_site	Transcription factor, T-box, conserved site	Interproscan
IPR036960	Homologous_superfamily	T-box superfamily	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11267	T-BOX PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001708	Biological Process	cell fate specification	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan