Detailed information of FUN_006002-T1 in Acropora pulchra

Genomic Location: ptg000001l:6657778...6676396
NR annotation: XP_029206650.2, linear gramicidin synthase subunit D-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1U8QWA2Glycine betaine reductase ATRR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ATRR PE=1 SV=1
Q70LM4Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1
B8N0E8Nonribosomal peptide synthetase asaC OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=asaC PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002098 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan
PF07993
all species →		NAD_binding_4Male sterility proteinFamilyInterproscan
PF00550
all species →		PP-bindingPhosphopantetheine attachment siteDomainInterproscan
PF13193
all species →		AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR009081
all species →		DomainPhosphopantetheine binding ACP domainInterproscan
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR013120
all species →		DomainFatty acyl-coenzyme A reductase, NAD-binding domainInterproscan
IPR020845
all species →		Conserved_siteAMP-binding, conserved siteInterproscan
IPR036736
all species →		Homologous_superfamilyACP-like superfamilyInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR010080
all species →		DomainThioester reductase-like domainInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR025110
all species →		DomainAMP-binding enzyme, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44845
all species →		CARRIER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006002-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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