Gene detail

Detailed information of FUN_006043-T1 in Colpophyllia natans

Genomic Location: contig_7:4682209...4692324
NR annotation: XP_020629877.1, A-kinase anchor protein 1, mitochondrial-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_006043-T1

TGCGGTTCTAAAACAGAAATAGCCCACAGGAGAATCCCAGTTCTCTCACGGCGGGCTAGCATTCGTCAGGGCTGGTGCGCATGTCACTGAAATGTTCTGATCATCGACAGCTTTTGATGTCGAAGAAACGAAACTGCCATTACGTCTACGTCGGTGGTTGAAGCGAAAAGTGTGAAGTTCTTTCTCCTGCGTTCGCTTAGACCAGCTCAGTTAGGTAATTGCTGCACATATTCCCCGGGACCGGAGTCGCGGATCTTTTCTAACACTAGTTAGCAACAGGGCTTTGCGATGCAATCCTGCAACTAAGCTTTACCTGTGCAATCAAGCTGCAATGGCTCAAACCTTTCCGCTATCTGTCCACAAACTAATACTGAAATCTTAGTTTTCTCAGTCGGGAGTGTTTTGTGCATGTTCACGTCTGTTACCCCGAAGTAAATGGTTTGCTTTGCCAACCGAAGTACACTCGTAATGAGTGCCAGCCCCAGCTCTGTAAATCGTACGTAAGTCCGTTTTCTAAGCCTCCAACAAAATGTTAAGCAATGATGATTCTTGAAACAGGTTAAAATATGTCTACTCTTGAGTAACCGAGGTCTGTTTTAGTAACGGCACAATTAAGATCCACTTTGCCAAGATCGTGTCTTTTTGTCCTTATGTGGTGCTGAGTGTGTGTTCTTTCATCCCTCGTTAGGTTGGCCgatatgcagttttcaatgaaACTGTTTGTTTCCTTGGTACTTCCAGCTGCCATCACTATCATTGTAAGCTTTCTGTGGATGAAGAAAAGGAGCAAAGAAGCCGAAGATCTCGACGAGCTTGAAGGGGAAGGAAATGTAAACAGGGAGGACGACAGAAAAGGAAATGTGGAGGACCACAATGTAATGAAGAATGAGATCAGTGAAGACAGGGAAGAGACTTTGGAAGCAAACTCTTCGGATGGGAATAGATACCCGCTAGAGAAACAACCAAGTACAACGGACAGCGTTCAGCAAGCGGATTCTGGAATAGGGACAAAGCCATCGACGAGTTCGGAACTCAAAGATCTGTCAGGCGGTGAAGAGTCGACCAGCGAGGGCAGTGTGGATAGCAGTACTTTGCTGAGCTTTACGGAAGGTTTTAACAATGGTACACCACCTCTTGGCGAAGACAACTTGAAGTCACGAAAAGGCTCACAAAACGGAGAAAAAGACGTCTGGGAAATAGAGTTCCCCCAGATATTGTGCGGAAGGTTGATAGGGCGGAAGGGAAAAAACGTGCGTGTTATTTCTGAGAAATCCGGTGCAAAGATTCGATTGATTCCGCAATCACCGGGTGAGGTTTCTACTCATAGAATAATTTCAGTGACAGGAAGTTCTTCTCAGATTAAAAGCGCGCTGGATTCTATTCACGAAAAGTTTCCATGCGTCCCTTTGACGCGGTTAAACTCGCCTCTGAATTGCGGCGTACCAGCAAACGCTTGCGTGCAGCCCATGGTCAGTCAGGCAACTGCCGCAATGCCTCACCAAGCGTTGCCTTTCGTTCAAGCAATGCTTCCAAGCGTTGCAAACTTCGACGTTGTGGTTACAAGTGTTACGGATGCCGGCCACTTCTTTGTTCAACTGCATAACGATTTCATGCAACGGCAGCTTCAAGATCTTCATCAGAACATGCTGCAGTGTTACGGACAAGGAACAGCGCCTCTAATTCTTCCTTTGCCGCAGCCTATTGTGGTAGGTTCTTGCTGTGCAGCGCCGGCATATACGTATAATGGCTGGTACAGAGCTCAGGTGCTTGGACCGACCGCTAATCCGGACGAAGTAGAGGTAAAATATTTGGATTATGGGGGATATGGCCGGATAGCTGCGTCGAGTCTTCGACAGTTAAGgGCTGACTTTTTGGCGCTGCCTTTTCAAGCAATCGAGTGCTACCTTGCGAATGTGATTCCTCTGCAAGGAGACACATTTTCAAGTGTGGCCAATGCTGTGCTAGAAGACTTGACAATGAATGCTCTGTTGACTGCCAGAGTTATCGGTCATAGAAGCGGCCTGCCGTGTCTAGAACTTTATCTCGTACAAGGCCAGCAGACAATCCTGATTAACAGGGAACTAGTGAACCGCGGCTTGGCTCGCTGGGCAGAAACTTGACGACAGTGAGAGTTTTATCACGTTTATCCTGGCCAAAGCAGCCGTTAAAATTTGCTTGTTCAACGATTTCCTGAGAAAAGGAGGAATTCAGCAGACAAAGCTAGTTGATAAGTGTATTCTATATTTGGTATGAAATAGGAAATGATGAAATTAACGGAAGGAAACTTTGGAt

Protein

Uniprot

Uniprot term	Description
Q92667	A-kinase anchor protein 1, mitochondrial OS=Homo sapiens OX=9606 GN=AKAP1 PE=1 SV=1
O08715	A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1 PE=1 SV=4
O88884	A-kinase anchor protein 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Akap1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013	KH_1	KH domain	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050621	Family	Tudor domain-containing	Interproscan
IPR047367	Domain	A-kinase anchor protein 1, Tudor domain	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22948	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16518	AKAP1; A-kinase anchor protein 1, mitochondrial	-	Protein phosphatases and associated proteins	ko01009	deepkoala