Gene detail

Detailed information of FUN_006128-T1 in Colpophyllia natans

Genomic Location: contig_7:5719906...5723102
NR annotation: XP_020611721.1, DELTA-alicitoxin-Pse2b-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_006128-T1

CCAAGCCTCGGCGCGAAGCAGACTGCCAGCAGTTCAATTTGTGTCGCTCAAGATCGCACGGTTTAGCTAATTCTATTAATTAGTCCTTGACATCAACCAATTATGCCGAAGTTTGGAGCGCTGATTTCAGTCCTTCTCTCTTTGCTGTTTCACCTGAGAGTTGCTGATGCCAAACCTGCCGGTGTTCAACCGCCAGTAGGCAGAGTGTATTACCTCGCAACGACCGATTTGCTTGGCGAAGAGTTGATCGGTGGTGCAACTGTCCTGATTCTAAACAGCACACAAGATTGCTTTGTCTGCAGTAAAAGCGAAATATTTGAAGATGATTCTTCTTACTTCGAAAACACCGAAGCCTTTTATTCAAGTATTGCAGAAAGCTCCAACCTAGGAGGAGCCTTAAAGAGGGACTTTACGCTGGGATTTACGTTGGATCAAACAACAAAATCGATTTCTCAAAGTAATCGCACCGTGAAAGGTTCCACACTAAACGTGTTATCGAAAGTTGGTCATTGTGTTGTGAAGCCAGAATGTATCTTTGATGAAAGCTACCACACATTATCTCAACATTTTGTTTCAGAATTTGAGAACTTGCCCCGAAGTATCGAGCTGCCTGGAGGAAAACTGAATTTCACTGCTTATGAGAAGTTTTTGAATGAGTTTGGATCTCACGTAGTAACAGGAGTTACGTACGGATCTAGAATGTATCAGCATTGCTTCTCTCGATCTGAAGAAGATTACGATGAACGAAACTTCATTGTAAGGGCGTGTGTTGCTTTTTCAGGTGGAACAGACGTtacaaaaatgaacatttcTACCTGTGCTGGTATAACCAAAGAAGAAGCTGAGGCTAGTTCATCCCTTGAAGTTAGCACACGATTAGTCATAAGAGGaggaacaaaagaaacaagggCAAAACTTTATGCTGAACGAACGAGCGAGCTTATAAGCCAATTTTTGACCGAAGCAAGTTGGGAAGAACCTATTGAATATTCATTTACTGCCGTGTGGACATTACTTGGACAAAGGTACATGGGTACAGAGCACTATGCAAAAGTGCGACATTTGGAGGGCTATTACTTGGGATTGAAGAACTTTGATTGTCCACTGATTATGCAAGAAAAACCAGATGGAACAGGATGGGCAATGCAGGGATTTTCTACAACGGACTTTTCAACTGCAGATGTACCATCATATAGGTGCTACATTCCTTATTCGGGTTGCCATGAAAGCGATGATTGCCATTATGGCCCTGGTATTTATTGCCAATGTAAGGGCTATTTTTGCTTTAAAGATAAAACCCTTACCCTCAACACTGGTGAACAGCGATTATCTGTGGTTCCACAATGGGACAGTTATTGGAAATGGCATGGTTGCCATTTGGGCTTCTTCTCTTGTGACTGCAGGAATGATAATGCGTTTAACTGGAGAAGCATCTGGGAGCAAGATGAAGATGGAGCAGATTATGGAAAAATGCTTCGTGCCTTGCATAGCAAAATGTTGTCTATAAACAGACATGCAGCCTCTGCACCTAAAGGAAGCAAGAATTCAAAAGAAGAACTCTAAGTGATCTAACAGAGACCTAGTCTTCAAGTATGTGATTCAAAGTAGTTAGCATGCACCAGTGATAATGAACATAAACAGCCCTAGCTAAACAGCCTTGTCTGCTACGACGCAAAATGGACAAATTTTGTGTGCTTGATTTGCGTCGTGTGGTGTTTTGTTACGTCGTTTAATTTGTAGCATCTGGAAGTTCCGGATAATTTAAGAATGAACTCTTTTCGTTTGTTTATATTCAGTTCAAACTCAGTTTAGGTGAAACCTTTAGAGTGAAGCCTTCAGGTTGATTTCAGAGTGAATTCTAAATGCTTTCATAGTGAAGTTTAAAAGCTTAGTTCGAGTGAAGTATTAACTGACTCCAATTAGCTGTATATATGAACTCAACAATTGTAGAATCCGAGAAGtgctgtaaatattttaatCCATTGGCTGATAAAAACAGCGACAGCTTAGTGAAAACTCTGACACCGGACAATGACATGAAGACTATGAAGGAAATGGTAGGAAACACAGTTGAAGTAAGCTATAACTTTTGCCTAGTAAGTTGCAGCATTGTCTCGTGTTCtattaattttgcatttttattagTGGTGTATCTTGTTACGATTTTAAGCTTTTTATTACTTAGTGTACTGTTTACCGGGCCATCGCTGTGGAACTTATCACAGGGACTAAGACAACTTATGTGTTCGTGAGGTATGCTTTGAAGCTAGTAACATACCGAGAAACAACAGGGTCAGTGGCGATGATATTAAGGAGGAAGTTACGTAGTTGTCTCTTCTTGTAAAATatgatataaataaataatctgAAAAGCAATTGAGATCTCGATAAgatcagtttatttcttttaaattcatGTGATAAAGAGCTGCTCGCCGCCTCAAAGTGCCCTGGATTTCCTTTGTTTAGAGTTAATGTTACTTTGATCTTATACACTACTACaagatttttattaaaaatgtcCTACAGATCTGTTCACTGCAAGCTCTGTATATCTGGACACGTATGATTAGGTCGACCAGTATGTAACGTATGTAACATTGATCCAATTAACATCTCTTTAACTGTCAAGTTTTGCGAGTTACTCTGCAGCGAAAGACATGATGTCAAGGACAAGACTTGTTATGGAAAGCATAAAAACACAACTCTAAGGCCAAATGCTATTACCTATGCTTTTTCAATCAGTGTTTTAATGCCATGTTTTAATAGAAACtatcacttacatgtatgtcGTACGCGTGGAACTGAATGTTTTTTACTTAGTGTAGTCGTCATCGCGCGGAAAAGCACGCAACATAATTAAAATCAACTGACATTTAAAA

Protein

Uniprot

Uniprot term	Description
Q76DT2	DELTA-thalatoxin-Avl2a OS=Actineria villosa OX=227975 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01823	MACPF	MAC/Perforin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020864	Domain	Membrane attack complex component/perforin (MACPF) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45742	COMPLEMENT COMPONENT C6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07818	PRF1; perforin 1	-	Type I diabetes mellitus	ko04940	deepkoala