Gene detail

Detailed information of FUN_006232-T2 in Dendrogyra cylindrus

Genomic Location: contig_6:8259975...8291593
NR annotation: KAJ7376159.1, hypothetical protein OS493_036634, partial [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_006232-T2

ATAACACGTTTTCAGGAAAACCTTTCAGACTTTCCTTTTACAATCTGCTTCCGTTTTATTGGTGACGTAATTTCACCAGGAAGCTGACACATTAATTAAAAAGGTAGAATATTCATTGCGCTTTCGTTATTTCAAACCGAAAATCATGGCCACCAAGAGGAAAGCAATACCTTACTTTATCATTGCAATTATTTTCTTACTTCAGTCAGGAACCTCCCCAGGCACACAAGCTTCCAGTGCAGGCTTGCCTGGCAAACCATCTATACCCAATGCAGACTCAGTTTCAACACATGAAATTCACGTATCATGGACTGCACCCAGTGATTCCGGTGATGGAATTACGGGGTACAATGTTCAGTGGCAGGTTGTTGGAAAATTAACGAAAGCTCAAAAGGTCGTTACAGGAAGCACTTCAGCAAGACTTGTTGTAACACCATACACTGAGTACGATATCCAAGTGAGAGCATACAATGGGAAAGGATACGGTCCTTGGTCAGCACCACTGAGAGTGAGATCTAAAGAATCTGTTCCTTCTGCTGCTCCTGGAAACTTCAAATTAGGTTCCAGTTCACCTCTTTCTTTGGATGTGTCGTGGGATGCAATACCTGTGGAGCAACAGCATGGAAAGCTTTTGGGTTACTATGTGTACTACAAGATAAGAGGTTCTGCGGCAATGCATAACAGAAGTGTTGGGCCAAACAAGACGACATACAAACTAACAGGACTTGAATTTAAAATTTATATTGTCAGTATTGCTGGATACACTGCCGTTGGTGTTGGCAAATTGAGTGCAGCACAGTCAAAAATTCCCAATCAAGGAGCTCCAACACCTCCCAGAAATTTTAAGCTTACCGTGGTGTCCTCCAAATCAATCAGGGCTTCGTGGGACGAGCCTCTAAagttaaatggcctttttaaaCGTTACGTGGTAATGTATGGCAAAGCAAGGGACAAACTGGATGGAAGGTTAtatacaacaagaacaacataTTTACTGTATCCCCTGGAAGAATTTACAGATTATTTTGTCGAAGTGTTTGCAGAAACAGCTCTTTCAGGTCCTACCTCTAATATTGAACAGGCAAAGACTTTTGAGGATGctccTAGCTCTCCTCCTACCATAAATGCACGAGAAACAAAAGCAGAAGATGCTCACACGATACGAGTCAAGTGGCATGAAATAGACAAGGAGAAACAAAATGGTGTTATATTGGGTTACATTGTGTATTACAACGAGAGAGGCCAACTTAAACGGTCCAGCCAGCAAACAACTGCAACAACCACCATTATCCCTGGATTAAAACCATTTAAAGAGTACTGCATCAAAGTAACAGGCTTCACTAAGATTGGAGCGTCGCCAGAAGGAAACTGTTTCTTTGTTAAAACCTTAGAATCAGGCCCAAGTCGTCCACAGAATGTGCAGGTCCGAGCCACGTCTTCTGTTTCAATTCATGTGAAGTGGGAAGAACCAGCTCAGCCAAATGGAGAGATAACAGAGTATATCATTTCTTACGGAACAAGCAAGGACTACCAGCCGCGCGAGAAAACGGTGACAGGGAGCACAATGGCACGTGTTCTAGATGGCTTGAACAAGTTCACTACCTACTTCATCAAAGTCAGAGGCAAAACTTCAAAGATGGGAAACACTTCCAAAATATTGAATGCAACAACGCACGAGGACAGTCCCGGACCTCCCATACAATTCATCGGACAAGTCATATCAGATATGGATATTCATCTGTCCTGGAAAGATCCTCTTAATTCCAACGGGATCGTAAGGTTTTACTACATCCGTATTTACGACACCAAAACTGGCCAACAGGTGAAAAATCTTGTGAACAAGACTGCGGTGAAGCAGGATCGCCCACAGTGGTATTTGATATCGAACCTAAAGCCTTTTACAAATTACACCTTCACAATCCAGGCTGTCACAATCAAGCCTGGGAAGATGGCAAACGTCACGGCAATGACTGAGCAAGGaggtatttttgtttttcgccatttttgtcaattttatcAAGTGTAACATTTGTATAATTTTGTCACATCAGTTGTTACTAACAGTTTTTAGGTTCTCTAACTCAGTTATTTTGAAGCTATTGTTAGCACTGTAAATGTGCGTAAGCTGGTTGCACCGCGCAGTAAACAGAATTGAGAATACTGTCATAACGAGCGAGATTAATTCGATTTATATCTAAAATGTACTTtcaggattgtttaaaaaatggcGGGCCGAGAGAGAGAGTGAGAGAGCCGTAGTCTTTTTGAACCTTGGTTTGTCGCtgtgagtagtatagtcggaatgaaacaaataccactttgggttggg

Protein

Uniprot

Uniprot term	Description
Q8AV58	Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1
Q58EX2	Protein sidekick-2 OS=Homo sapiens OX=9606 GN=SDK2 PE=1 SV=3
Q7Z5N4	Protein sidekick-1 OS=Homo sapiens OX=9606 GN=SDK1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050713	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan